GTEx V8
Gene Name : ubiquitin specific peptidase 40
NCBI GeneID : 55230 NCBI : NM_001365479.2 NCBI : NP_001352408.1
Chromosome : 2 Strand : -
MANE Select : ENST00000678225 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE USP40 ENSG00000085982 233475526 233566782
GTEx V8 USP40 ENSG00000085982 233475519 233566782
Gencode v40 USP40 ENSG00000085982 233475519 233566782

Gencode v26 (GTEx V8) Gencode v40
V8
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000483519 6 2722 4 0 10 53.32 1 ENST00000483519 6 2722 5 0 11
ENST00000251722 32 5692 1 3708 2 11.04 2 A:1 ENST00000251722 32 5692 2 3708 3 A:1
ENST00000450966 31 5616 2 3744 1 8.55 3 ENST00000450966 31 5616 3 3744 1
ENST00000430158 10 1047 6 740 4 5.93 4 ENST00000430158 10 1047 7 740 5
ENST00000483216 6 641 11 0 10 5.87 5 ENST00000483216 6 641 12 0 11
ENST00000427112 31 3744 3 3708 2 3.41 6 A:1 ENST00000427112 31 3744 4 3708 3 A:1
ENST00000450940 7 670 9 292 9 2.62 7 ENST00000450940 7 670 10 292 10
ENST00000427947 6 794 8 0 10 2.06 8 ENST00000427947 6 794 9 0 11
ENST00000409945 6 1946 5 492 5 1.91 9 ENST00000409945 6 1946 6 492 6
ENST00000496298 5 665 10 0 10 1.49 10 ENST00000496298 5 665 11 0 11
ENST00000484528 5 933 7 0 10 1.00 11 ENST00000484528 5 933 8 0 11
ENST00000452724 3 453 15 297 7 0.78 12 ENST00000452724 3 453 16 297 8
ENST00000464956 2 185 17 0 10 0.78 13 ENST00000464956 2 185 18 0 11
ENST00000473191 5 590 13 0 10 0.58 14 ENST00000473191 5 590 14 0 11
ENST00000485943 5 568 14 0 10 0.29 15 ENST00000485943 5 568 15 0 11
ENST00000454354 3 348 16 348 6 0.26 16 ENST00000454354 3 348 17 348 7
ENST00000443711 4 628 12 297 7 0.12 17 ENST00000443711 4 628 13 297 8
Gencode v26 (GTEx V8) Gencode v40
V8
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000678225 32 5695 1 3711 2 P:3

ENSG00000085982 USP40

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