GTEx V8
Gene Name : collagen type IX alpha 1 chain
NCBI GeneID : 1297 NCBI : NM_001851.6 NCBI : NP_001842.3
Chromosome : 6 Strand : -
MANE Select : ENST00000357250 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE COL9A1 ENSG00000112280 70216126 70303084
GTEx V8 COL9A1 ENSG00000112280 70215060 70303083
Gencode v40 COL9A1 ENSG00000112280 70216039 70303084

Gencode v26 (GTEx V8) Gencode v40
V8
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000320755 32 3059 2 2037 2 80.24 1 ENST00000320755 32 3051 4 2037 3
ENST00000493682 15 1117 6 0 4 7.49 2 ENST00000493682 19 3513 3 0 8
ENST00000370496 11 1372 5 987 3 3.90 3 ENST00000370496 11 1372 13 987 5
ENST00000489611 27 1940 3 0 4 2.14 4 ENST00000489611 27 1940 11 0 8
ENST00000489861 4 243 10 0 4 1.88 5 ENST00000489861 4 243 16 0 8
ENST00000357250 38 4761 1 2766 1 1.81 6 P:1 ENST00000357250 38 3697 2 2766 1 P:1
ENST00000447041 13 690 8 0 4 1.04 7 ENST00000447041 13 690 14 157 7
ENST00000360859 13 699 7 0 4 0.70 8 ENST00000360859 19 2193 10 0 8
ENST00000486080 10 1844 4 0 4 0.62 9 ENST00000486080 10 1844 12 0 8
ENST00000470652 2 531 9 0 4 0.18 10 ENST00000470652 2 531 15 0 8
Gencode v26 (GTEx V8) Gencode v40
V8
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000644493 33 2548 8 339 6
ENST00000000000 ENST00000682313 5 2545 9 0 8
ENST00000000000 ENST00000683602 26 4339 1 0 8
ENST00000000000 ENST00000683758 31 2812 7 1899 4
ENST00000000000 ENST00000683980 33 2957 5 2067 2
ENST00000000000 ENST00000684176 32 2849 6 0 8

ENSG00000112280 COL9A1

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