TEXMST Gene Info

Gene Name : serine hydroxymethyltransferase 2

GTEx V9

NCBI GeneID : 6472	NCBI : NM_005412.6	NCBI : NP_005403.2
Chromosome : 12	Strand : +
MANE Select : ENST00000328923	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SHMT2	ENSG00000182199	57229711	57234935
GTEx V8	SHMT2	ENSG00000182199	57229326	57234935
Gencode v40	SHMT2	ENSG00000182199	57229572	57234935

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000414700	12	2006	7	1452	3	30.92	1			ENST00000414700	12	2006	7	1452	3
	ENST00000556825	11	2215	4	261	19	18.89	2			ENST00000556825	11	2215	3	261	19
	ENST00000557487	12	1918	8	1485	2	13.80	3			ENST00000557487	12	1918	8	1485	2
	ENST00000554600	6	837	18	0	25	7.28	4			ENST00000554600	6	837	18	0	25
	ENST00000557433	12	1904	9	516	12	5.19	5			ENST00000557433	12	1904	9	516	12
	ENST00000554467	6	3416	1	0	25	4.21	6			ENST00000554467	6	3416	1	0	25
	ENST00000557529	6	1369	13	793	6	3.84	7			ENST00000557529	6	1369	13	793	6
	ENST00000557740	4	569	28	0	25	2.24	8			ENST00000557740	4	569	28	0	25
	ENST00000555116	11	1885	10	198	21	2.19	9			ENST00000555116	11	1885	10	198	21
	ENST00000556798	2	525	34	0	25	1.75	10			ENST00000556798	2	525	34	0	25
	ENST00000555634	8	964	14	703	8	1.62	11			ENST00000555634	8	964	14	703	8
	ENST00000553324	3	566	30	0	25	1.20	12			ENST00000553324	3	566	30	0	25
	ENST00000556689	6	768	21	713	7	0.96	13			ENST00000556689	6	768	21	713	7
	ENST00000553950	3	584	24	0	25	0.94	14			ENST00000553950	3	584	24	0	25
	ENST00000449049	12	2121	6	1452	3	0.89	15			ENST00000449049	12	2121	6	1452	3
	ENST00000553474	12	1765	11	1452	3	0.71	16			ENST00000553474	12	1765	11	1452	3
	ENST00000556737	3	572	27	442	16	0.64	17			ENST00000556737	3	572	27	442	16
	ENST00000554975	6	780	20	647	9	0.51	18			ENST00000554975	6	780	20	647	9
	ENST00000555563	7	895	16	261	19	0.46	19			ENST00000555563	7	895	16	261	19
	ENST00000557348	11	1659	12	198	21	0.31	20			ENST00000557348	11	1659	12	198	21
	ENST00000555213	3	611	22	0	25	0.23	21			ENST00000555213	3	611	22	0	25
	ENST00000328923	12	2537	2	1515	1	0.23	22	☀	P:1	ENST00000328923	12	2157	4	1515	1	☀	P:1
	ENST00000557302	2	457	35	0	25	0.19	23			ENST00000557302	2	457	35	0	25
	ENST00000553949	3	552	32	0	25	0.18	24			ENST00000553949	3	552	32	0	25
	ENST00000557269	5	576	26	159	24	0.11	25			ENST00000557269	5	576	26	159	24
	ENST00000555774	11	2311	3	198	21	0.08	26			ENST00000555774	11	2311	2	198	21
	ENST00000553529	4	562	31	442	16	0.08	27			ENST00000553529	4	562	31	442	16
	ENST00000553868	2	941	15	0	25	0.08	28			ENST00000553868	2	941	15	0	25
	ENST00000555773	4	600	23	449	15	0.06	29			ENST00000555773	4	600	23	449	15
	ENST00000553837	12	2152	5	579	10	0.06	30			ENST00000553837	12	2152	5	579	10
	ENST00000557703	4	542	33	426	18	0.06	31			ENST00000557703	4	542	33	426	18
	ENST00000554656	6	817	19	0	25	0.05	32			ENST00000554656	6	817	19	0	25
	ENST00000554310	5	579	25	480	13	0.03	33			ENST00000554310	5	579	25	480	13
	ENST00000557427	5	569	28	477	14	0.02	34			ENST00000557427	5	569	28	477	14
	ENST00000554604	7	879	17	579	10	0.01	35			ENST00000554604	7	879	17	579	10

ENSG00000182199 SHMT2

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