TEXMST Gene Info

Gene Name : patched 1

GTEx V9

NCBI GeneID : 5727	NCBI : NM_001083603.3	NCBI : NP_001077072.1
Chromosome : 9	Strand : -
MANE Select : ENST00000331920	MANE Plus Clinical : ENST00000437951

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	PTCH1	ENSG00000185920	95442980	95516971
GTEx V8	PTCH1	ENSG00000185920	95442979	95517057
Gencode v40	PTCH1	ENSG00000185920	95442979	95517057

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000546744	3	4389	9	0	19	34.63	1			ENST00000546744	3	4389	10	0	18
	ENST00000549678	2	578	18	0	19	10.66	3			ENST00000549678	2	578	19	0	18
	ENST00000331920	24	8057	3	4344	1	7.41	4	☀	P:1	ENST00000331920	24	8662	2	4344	1	☀	P:1
	ENST00000375290	21	10631	1	1461	8	6.83	5			ENST00000375290	21	10631	1	1461	6
	ENST00000437951	24	8049	4	4146	3	4.49	6			ENST00000437951	24	7905	4	4341	2
	ENST00000429896	24	6563	7	3891	5	2.88	7			ENST00000429896	24	6563	7	3891	4
	ENST00000375271	8	1058	12	1058	9	2.34	8			ENST00000375271	8	1058	13	1058	8
	ENST00000550136	2	2388	10	0	19	1.79	9			ENST00000550136	2	2388	11	0	18
	ENST00000551630	4	539	21	276	15	1.63	11			ENST00000551630	4	539	22	276	14
	ENST00000547615	4	525	23	0	19	1.51	12			ENST00000547615	4	525	24	0	18
	ENST00000430669	23	8232	2	4146	3	0.74	13			ENST00000430669	23	8232	3	4146	3
	ENST00000468211	5	1254	11	552	10	0.70	14			ENST00000468211	5	1254	12	552	9
	ENST00000551623	4	366	24	51	18	0.69	15			ENST00000551623	4	366	25	51	17
	ENST00000548945	2	243	26	0	19	0.65	16			ENST00000548945	2	243	27	0	18
	ENST00000488809	2	301	25	0	19	0.55	17			ENST00000488809	2	301	26	0	18
	ENST00000551425	2	241	27	0	19	0.52	18			ENST00000551425	2	241	28	0	18
	ENST00000548420	3	553	19	200	17	0.42	19			ENST00000548420	3	553	20	200	16
	ENST00000548379	5	548	20	0	19	0.37	20			ENST00000548379	5	548	21	0	18
	ENST00000551845	7	809	16	522	11	0.11	22			ENST00000551845	7	809	17	522	10
	ENST00000553256	5	537	22	0	19	0.10	23			ENST00000553256	5	537	23	0	18
	ENST00000550914	5	630	17	240	16	0.08	24			ENST00000550914	5	630	18	240	15
	ENST00000546820	7	864	15	522	11	0.00	25			ENST00000546820	7	864	16	522	10
	ENST00000553011	7	1037	13	522	11	0.00	26			ENST00000553011	7	1037	14	522	10
	ENST00000547672	7	881	14	522	11	0.00	27			ENST00000547672	7	881	15	522	10

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000421141	24	7659	6	3891	5	19.07	2			ENST00000000000
	ENST00000418258	24	7815	5	3891	5	1.63	10			ENST00000000000
	ENST00000375274	24	4720	8	4341	2	0.18	21			ENST00000000000
	ENST00000000000										ENST00000687744	2	5236	8	0	18
	ENST00000000000										ENST00000690194	24	7135	5	1371	7
	ENST00000000000										ENST00000692981	23	7000	6	3891	4
	ENST00000000000										ENST00000693534	10	4653	9	0	18

ENSG00000185920 PTCH1

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