TEXMST Gene Info

SYNGAP1

GTEx V8

Gene Name : synaptic Ras GTPase activating protein 1

GTEx V9

NCBI GeneID : 8831	NCBI : NM_006772.3	NCBI : NP_006763.2
Chromosome : 6	Strand : +
MANE Select : ENST00000646630	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SYNGAP1	ENSG00000197283	33420065	33453689
GTEx V8	SYNGAP1	ENSG00000197283	33419660	33457541
Gencode v40	SYNGAP1	ENSG00000197283	33419660	33453689

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000418600	19	5828	2	3858	4	41.80	1			ENST00000418600	19	5827	3	3858	6
	ENST00000638142	14	2499	7	1779	7	16.36	2			ENST00000638142	14	2499	11	1779	11
	ENST00000449372	18	3930	6	3920	2	9.27	3			ENST00000449372	18	3929	10	3879	5
	ENST00000628646	19	4264	5	3900	3	6.99	4			ENST00000628646	19	4264	7	3900	4
	ENST00000629380	19	9862	1	4032	1	6.54	5		P:1	ENST00000629380	19	6010	2	4032	1		P:1
	ENST00000470232	2	394	9	0	9	6.47	6			ENST00000470232	2	394	13	0	12
	ENST00000293748	20	4556	3	3855	5	4.15	7			ENST00000293748	20	4556	5	3855	7
	ENST00000636146	2	161	12	0	9	3.86	8			ENST00000636146	2	161	16	0	12
	ENST00000637721	2	190	11	0	9	1.50	9			ENST00000637721	2	190	15	0	12
	ENST00000479510	10	2073	8	0	9	1.09	10			ENST00000479510	10	2073	12	0	12
	ENST00000428982	17	4339	4	3855	5	0.82	11			ENST00000428982	17	4339	6	3855	7
	ENST00000637911	2	157	14	0	9	0.48	12			ENST00000637911	2	157	18	0	12
	ENST00000637490	2	132	17	0	9	0.06	14			ENST00000637490	2	132	20	0	12
	ENST00000635885	2	191	10	0	9	0.05	15			ENST00000635885	2	191	14	0	12
	ENST00000636075	2	148	15	0	9	0.04	16			ENST00000636075	2	148	19	0	12
	ENST00000636640	2	118	19	0	9	0.02	18			ENST00000636640	2	118	21	0	12
	ENST00000636116	2	161	12	0	9	0.00	19			ENST00000636116	2	161	16	0	12

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000636905	2	123	18	76	8	0.47	13			ENST00000000000
	ENST00000637967	2	148	15	0	9	0.04	17			ENST00000000000
	ENST00000000000										ENST00000636193	2	100	22	0	12
	ENST00000000000										ENST00000636436	2	100	22	0	12
	ENST00000000000										ENST00000636443	2	79	30	0	12
	ENST00000000000										ENST00000636731	2	100	22	0	12
	ENST00000000000										ENST00000637052	2	100	22	0	12
	ENST00000000000										ENST00000637194	2	100	22	0	12
	ENST00000000000										ENST00000637587	2	100	22	0	12
	ENST00000000000										ENST00000637671	2	100	22	0	12
	ENST00000000000										ENST00000638127	2	100	22	0	12
	ENST00000000000										ENST00000644458	19	4051	8	3927	3
	ENST00000000000										ENST00000645250	17	4040	9	3750	10
	ENST00000000000										ENST00000646630	19	6015	1	4032	1	☀	P:1
	ENST00000000000										ENST00000682587	17	5604	4	3774	9

ENSG00000197283 SYNGAP1

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