TEXMST Gene Info

Gene Name : catenin alpha 1

GTEx V8

NCBI GeneID : 1495	NCBI : NM_001903.5	NCBI : NP_001894.2
Chromosome : 5	Strand : +
MANE Select : ENST00000302763	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	CTNNA1	ENSG00000044115	138753425	138935034
GTEx V9	CTNNA1	ENSG00000044115	138610966	138935034
Gencode v40	CTNNA1	ENSG00000044115	138610966	138935034

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000302763	18	3756	2	2721	1	81.65	1	☀	P:1	ENST00000302763	18	3754	2	2721	1	☀	P:1
	ENST00000522792	2	2044	6	0	20	8.06	2			ENST00000522792	2	2044	6	0	33
	ENST00000540387	12	2684	5	1611	4	3.79	3			ENST00000540387	12	2684	5	1611	4
	ENST00000522013	5	874	7	317	11	1.89	4			ENST00000522013	5	874	7	317	16
	ENST00000517904	3	661	16	0	20	1.11	5			ENST00000517904	3	661	17	0	33
	ENST00000520339	4	868	10	303	12	0.56	6			ENST00000520339	4	868	10	303	17
	ENST00000627109	19	3831	1	2526	2	0.47	7			ENST00000627109	19	3831	1	2526	2
	ENST00000523298	5	577	18	331	10	0.37	8			ENST00000523298	5	577	23	331	15
	ENST00000521941	2	224	29	0	20	0.36	9			ENST00000521941	2	224	44	0	33
	ENST00000521387	5	871	8	0	20	0.34	10			ENST00000521387	5	871	8	0	33
	ENST00000522730	2	750	12	0	20	0.26	11			ENST00000522730	2	750	12	0	33
	ENST00000517980	6	696	14	353	9	0.25	12			ENST00000517980	6	696	15	353	14
	ENST00000519634	6	589	17	152	15	0.16	13			ENST00000519634	6	589	19	152	24
	ENST00000521724	17	2741	4	114	17	0.11	14			ENST00000521724	17	2741	4	114	28
	ENST00000519489	2	358	28	0	20	0.10	15			ENST00000519489	2	358	43	0	33
	ENST00000519768	5	560	23	61	19	0.09	16			ENST00000519768	5	560	29	61	32
	ENST00000523685	6	694	15	385	8	0.09	17			ENST00000523685	6	694	16	385	11
	ENST00000520260	4	710	13	96	18	0.08	18			ENST00000520260	4	710	14	96	30
	ENST00000518585	4	568	20	0	20	0.07	19			ENST00000518585	4	568	25	0	33
	ENST00000519113	4	859	11	419	7	0.06	20			ENST00000519113	4	859	11	419	8
	ENST00000523912	4	545	25	468	6	0.05	21			ENST00000523912	4	545	34	468	7
	ENST00000518263	4	548	24	0	20	0.02	22			ENST00000518263	4	548	33	0	33
	ENST00000521683	6	565	22	213	13	0.02	23			ENST00000521683	6	565	27	213	21
	ENST00000521640	6	568	20	122	16	0.02	24			ENST00000521640	6	568	25	122	26
	ENST00000518825	18	3536	3	2526	2	0.01	25			ENST00000518825	18	3536	3	2526	2
	ENST00000519309	7	869	9	168	14	0.01	26			ENST00000519309	7	869	9	168	23
	ENST00000518910	4	572	19	484	5	0.01	27			ENST00000518910	4	572	24	484	6
	ENST00000518919	2	498	26	0	20	0.01	28			ENST00000518919	2	498	37	0	33
	ENST00000517534	3	416	27	0	20	0.01	29			ENST00000517534	3	416	41	0	33

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000517533	5	579	21	357	13
	ENST00000000000										ENST00000517656	6	554	32	118	27
	ENST00000000000										ENST00000518381	5	487	38	225	20
	ENST00000000000										ENST00000519116	5	562	28	275	19
	ENST00000000000										ENST00000520158	6	719	13	647	5
	ENST00000000000										ENST00000520400	5	589	19	0	33
	ENST00000000000										ENST00000520520	3	484	39	411	9
	ENST00000000000										ENST00000520522	4	390	42	152	24
	ENST00000000000										ENST00000520865	6	557	30	110	29
	ENST00000000000										ENST00000521368	5	544	35	67	31
	ENST00000000000										ENST00000522052	6	579	21	195	22
	ENST00000000000										ENST00000522227	5	642	18	369	12
	ENST00000000000										ENST00000523275	5	536	36	390	10
	ENST00000000000										ENST00000524127	4	483	40	282	18
	ENST00000000000										ENST00000524292	4	557	30	0	33

ENSG00000044115 CTNNA1

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