GTEx V9
Gene Name : LIM and calponin homology domains 1
NCBI GeneID : 22998 NCBI : NM_001330672.2 NCBI : NP_001317601.1
Chromosome : 4 Strand : +
MANE Select : ENST00000503057 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE LIMCH1 ENSG00000064042 41538157 41700044
GTEx V9 LIMCH1 ENSG00000064042 41359606 41700044
Gencode v40 LIMCH1 ENSG00000064042 41359606 41700044

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000396595 21 5740 2 2709 9 5.61 6 ENST00000396595 21 5740 3 2709 10
ENST00000313860 27 6165 1 3252 2 7.65 5 A:2 ENST00000313860 27 6165 2 3252 2 A:2
ENST00000512228 4 473 17 0 14 0.36 11 ENST00000512228 4 473 21 0 18
ENST00000503057 32 5467 3 4404 1 43.82 1 ENST00000503057 32 7697 1 4404 1
ENST00000514190 6 540 15 0 14 0.26 12 ENST00000514190 6 540 19 0 18
ENST00000509454 3 1506 12 483 11 7.68 4 ENST00000509454 3 1506 15 483 14
ENST00000509638 7 1570 11 462 12 4.48 7 ENST00000509638 7 1570 14 462 15
ENST00000515785 2 1129 13 0 14 0.53 10 ENST00000515785 2 1129 16 0 18
ENST00000511424 7 551 14 78 13 0.07 16 ENST00000511424 7 551 18 78 17
ENST00000511496 23 3439 10 2694 10 14.55 2 ENST00000511496 23 3439 12 2694 11
ENST00000512820 26 5071 5 3210 3 2.96 8 ENST00000512820 26 5071 6 3210 3
ENST00000508501 26 5054 7 3171 5 0.07 15 P:4 ENST00000508501 26 5054 8 3171 5 P:4
ENST00000513024 26 5129 4 2733 8 10.65 3 ENST00000513024 26 5129 5 2733 9
ENST00000515847 7 490 16 0 14 0.13 14 ENST00000515847 7 490 20 0 18
ENST00000509277 21 3474 9 2751 7 0.96 9 ENST00000509277 21 3474 11 2751 8
ENST00000512632 23 4792 8 2943 6 0.17 13 ENST00000512632 23 4792 9 2943 6
ENST00000512946 26 5057 6 3174 4 0.06 17 A:1 ENST00000512946 26 5057 7 3174 4 A:1
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000381753 20 5705 4 2673 13
ENST00000000000 ENST00000446625 8 789 17 380 16
ENST00000000000 ENST00000505705 3 437 22 0 18
ENST00000000000 ENST00000508466 21 3051 13 2753 7
ENST00000000000 ENST00000514096 20 3543 10 2694 11

ENSG00000064042 LIMCH1

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