GTEx V9
Gene Name : MCF.2 cell line derived transforming sequence
NCBI GeneID : 4168 NCBI : NM_001171876.2 NCBI : NP_001165347.1
Chromosome : X Strand : -
MANE Select : ENST00000519895 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE MCF2 ENSG00000101977 139581770 139708167
GTEx V9 MCF2 ENSG00000101977 139581769 139708227
Gencode v40 MCF2 ENSG00000101977 139581769 139708227

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000536274 22 3461 3 2466 3 82.67 1 ENST00000536274 22 3461 4 2466 7
ENST00000370576 25 3688 2 2778 2 13.83 2 ENST00000370576 25 3864 2 2778 5
ENST00000483690 4 752 4 0 4 3.31 3 ENST00000483690 4 752 10 0 10
ENST00000520602 28 3945 1 2958 1 0.19 4 A:2 ENST00000520602 28 3945 1 3087 1 A:2
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000338585 26 2826 6 2826 4
ENST00000000000 ENST00000370573 23 2583 7 2583 6
ENST00000000000 ENST00000414978 28 3813 3 2958 3 A:2
ENST00000000000 ENST00000437564 13 1988 8 1288 9
ENST00000000000 ENST00000446225 16 1916 9 1587 8
ENST00000000000 ENST00000519895 29 3346 5 3006 2 P:2

ENSG00000101977 MCF2

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