GTEx V9
Gene Name : ubiquitin specific peptidase 42
NCBI GeneID : 84132 NCBI : NM_032172.3 NCBI : NP_115548.1
Chromosome : 7 Strand : +
MANE Select : ENST00000306177 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE USP42 ENSG00000106346 6104949 6161564
GTEx V9 USP42 ENSG00000106346 6104883 6161564
Gencode v40 USP42 ENSG00000106346 6104948 6161564

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000306177 18 5155 1 3951 1 92.49 1 P:1 ENST00000306177 18 5090 1 3951 1 P:1
ENST00000479544 16 4286 3 0 6 1.97 4 ENST00000479544 16 4286 3 0 7
ENST00000521713 17 5017 2 660 3 0.43 5 ENST00000521713 17 5017 2 660 4
ENST00000404008 12 1380 5 525 4 0.42 6 ENST00000404008 12 1380 6 525 5
ENST00000426246 13 3611 4 3131 2 2.05 3 ENST00000426246 13 3611 4 3131 2
ENST00000451154 4 520 6 297 5 2.64 2 ENST00000451154 4 520 7 297 6
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000465073 12 1490 5 1425 3

ENSG00000106346 USP42

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