GTEx V9
Gene Name : sodium voltage-gated channel alpha subunit 2
NCBI GeneID : 6326 NCBI : NM_001371246.1 NCBI : NP_001358175.1
Chromosome : 2 Strand : +
MANE Select : ENST00000375437 MANE Plus Clinical : ENST00000631182
  Gene Symbol Ensembl Gene ID Start End
MANE SCN2A ENSG00000136531 165239414 165392304
GTEx V9 SCN2A ENSG00000136531 165194992 165392310
Gencode v40 SCN2A ENSG00000136531 165194992 165392310

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000637266 27 8610 8 6018 1 0.46 11 P:1 ENST00000637266 27 8610 9 6018 1 P:1
ENST00000375437 27 8792 6 6018 1 0.73 8 P:1 ENST00000375437 27 8776 6 6018 1 P:1
ENST00000480032 25 11676 1 0 13 5.69 5 ENST00000480032 25 11676 1 0 17
ENST00000637367 14 4408 13 279 11 14.86 2 ENST00000637367 14 4408 13 279 15
ENST00000283256 27 8660 7 6018 1 0.48 10 P:1 ENST00000283256 27 8660 8 6018 1 P:1
ENST00000640791 3 8169 12 0 13 56.44 1 ENST00000640791 3 8169 12 0 17
ENST00000636662 27 9456 2 279 11 8.35 4 ENST00000636662 27 9456 2 279 15
ENST00000638151 14 2832 15 0 13 0.06 16 ENST00000638151 14 2832 15 0 17
ENST00000636985 27 8856 5 5622 6 0.10 13 ENST00000636985 27 8856 5 5622 6
ENST00000636384 29 9007 3 2196 7 0.59 9 ENST00000636384 29 9007 3 2196 7
ENST00000636769 28 8573 9 2193 8 0.06 15 ENST00000636769 28 8573 10 2193 8
ENST00000635945 15 3119 14 0 13 9.57 3 ENST00000635945 15 3119 14 0 17
ENST00000636135 28 8519 10 1677 9 0.24 12 ENST00000636135 28 8519 11 1677 9
ENST00000486878 4 661 16 537 10 0.09 14 ENST00000486878 4 661 20 537 12
ENST00000636071 28 8881 4 6018 1 1.23 6 ENST00000636071 28 8881 4 6018 1
ENST00000631182 27 8430 11 6018 1 1.06 7 ENST00000631182 27 8776 6 6018 1
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000424833 11 1807 16 1517 10
ENST00000000000 ENST00000673831 3 1145 18 393 14
ENST00000000000 ENST00000673883 3 964 19 423 13
ENST00000000000 ENST00000674133 6 1455 17 1256 11

ENSG00000136531 SCN2A

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