GTEx V9
Gene Name : cholinergic receptor nicotinic alpha 1 subunit
NCBI GeneID : 1134 NCBI : NM_000079.4 NCBI : NP_000070.1
Chromosome : 2 Strand : -
MANE Select : ENST00000348749 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE CHRNA1 ENSG00000138435 174747592 174764472
GTEx V9 CHRNA1 ENSG00000138435 174747591 174787935
Gencode v40 CHRNA1 ENSG00000138435 174747591 174787935

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000348749 9 1984 1 1374 3 73.16 1 P:1 ENST00000348749 9 1984 2 1374 2 P:1
ENST00000261007 10 1980 2 1449 1 20.44 2 ENST00000261007 10 1980 3 1449 1
ENST00000409542 8 1460 8 1128 5 0.04 8 ENST00000409542 8 1460 9 1128 4
ENST00000409323 6 1585 6 810 6 5.63 3 ENST00000409323 6 1585 7 810 7
ENST00000416004 2 1879 3 0 8 0.09 6 ENST00000416004 2 1879 4 0 9
ENST00000435083 8 1596 5 246 7 0.05 7 ENST00000435083 8 1596 6 246 8
ENST00000409219 8 1466 7 1134 4 0.18 5 ENST00000409219 8 1466 8 1134 3
ENST00000636168 10 1862 4 1413 2 0.41 4 ENST00000636168 10 1862 5 885 5
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000672640 10 2108 1 885 5

ENSG00000138435 CHRNA1

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