TEXMST Gene Info

SCN11A

GTEx V9

Gene Name : sodium voltage-gated channel alpha subunit 11

GTEx V8

NCBI GeneID : 11280	NCBI : NM_001349253.2	NCBI : NP_001336182.1
Chromosome : 3	Strand : -
MANE Select : ENST00000302328	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SCN11A	ENSG00000168356	38845764	39051944
GTEx V9	SCN11A	ENSG00000168356	38845768	38950561
Gencode v40	SCN11A	ENSG00000168356	38845763	39052157

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000302328	26	6500	1	5376	1	98.41	1	☀	P:2	ENST00000302328	30	6793	2	5376	1	☀	P:2
	ENST00000444237	25	5729	2	4335	2	1.59	2			ENST00000444237	25	5729	3	4335	6

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000456224	25	5262	7	5262	3		A:2
	ENST00000000000										ENST00000665106	7	2614	10	0	10
	ENST00000000000										ENST00000668754	33	7285	1	5376	1		P:2
	ENST00000000000										ENST00000674755	2	688	12	0	10
	ENST00000000000										ENST00000674979	3	560	13	0	10
	ENST00000000000										ENST00000675223	27	5455	4	4335	6
	ENST00000000000										ENST00000675269	3	1188	11	0	10
	ENST00000000000										ENST00000675672	27	5430	5	2883	8
	ENST00000000000										ENST00000675892	25	5196	8	5196	4
	ENST00000000000										ENST00000676045	27	5420	6	327	9
	ENST00000000000										ENST00000676176	25	4995	9	4995	5
	ENST00000000000										ENST00000676333	4	481	14	0	10

ENSG00000168356 SCN11A

TPM Log2 Log10

Copyright © 2022 TDL Lab. All Rights Reserved.