TEXMST Gene Info

LIMS1

GTEx V9

Gene Name : LIM zinc finger domain containing 1

GTEx V8

NCBI GeneID : 3987	NCBI : NM_001193483.3	NCBI : NP_001180412.1
Chromosome : 2	Strand : +
MANE Select : ENST00000544547	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	LIMS1	ENSG00000169756	108534470	108687246
GTEx V9	LIMS1	ENSG00000169756	108534354	108687246
Gencode v40	LIMS1	ENSG00000169756	108533670	108687246

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000544547	10	4461	1	1014	3	16.95	2	☀		ENST00000544547	10	4354	2	1014	6	☀
☉	ENST00000393310	10	4392	2	978	4	47.07	1			ENST00000393310	10	4392	1	978	9
	ENST00000414829	3	439	14	354	8	0.19	12			ENST00000414829	3	439	23	354	16
	ENST00000434274	3	779	7	168	10	12.96	4			ENST00000434274	3	779	17	168	18
	ENST00000496653	3	626	11	0	11	2.16	6			ENST00000496653	3	626	20	0	19
	ENST00000474038	2	679	9	0	11	0.28	11			ENST00000474038	2	679	19	0	19
	ENST00000542845	6	727	8	628	6	1.35	7			ENST00000542845	6	727	18	628	15
	ENST00000332345	10	1235	6	978	4	0.98	9			ENST00000332345	10	1235	15	978	9
	ENST00000422797	4	1544	5	303	9	3.25	5			ENST00000422797	4	1544	9	303	17
	ENST00000462817	3	566	12	0	11	0.51	10			ENST00000462817	3	566	21	0	19
	ENST00000449684	4	492	13	0	11	0.01	14			ENST00000449684	4	492	22	0	19
	ENST00000338045	10	1876	3	1164	1	13.14	3		P:3	ENST00000338045	10	1876	4	1164	2		P:3
	ENST00000409441	10	1627	4	1089	2	1.14	8		A:1	ENST00000409441	10	1627	6	1089	3		A:1

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000428064	5	637	10	530	7	0.01	13			ENST00000000000
	ENST00000000000										ENST00000410093	10	1526	10	990	8
	ENST00000000000										ENST00000695516	10	1467	11	1041	5
	ENST00000000000										ENST00000695517	11	1635	5	1047	4
	ENST00000000000										ENST00000695518	10	1327	13	978	9
	ENST00000000000										ENST00000695519	10	1592	8	999	7
	ENST00000000000										ENST00000695520	11	4332	3	786	14
	ENST00000000000										ENST00000695521	11	1597	7	978	9
	ENST00000000000										ENST00000695522	11	1461	12	1197	1
	ENST00000000000										ENST00000695523	10	1249	14	813	13
	ENST00000000000										ENST00000695524	5	1110	16	0	19

ENSG00000169756 LIMS1

TPM Log2 Log10

Copyright © 2022 TDL Lab. All Rights Reserved.