GTEx V9
Gene Name : patched 1
NCBI GeneID : 5727 NCBI : NM_001083603.3 NCBI : NP_001077072.1
Chromosome : 9 Strand : -
MANE Select : ENST00000331920 MANE Plus Clinical : ENST00000437951
  Gene Symbol Ensembl Gene ID Start End
MANE PTCH1 ENSG00000185920 95442980 95516971
GTEx V9 PTCH1 ENSG00000185920 95442979 95517057
Gencode v40 PTCH1 ENSG00000185920 95442979 95517057

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000546744 3 4389 6 0 7 7.65 5 ENST00000546744 3 4389 10 0 18
ENST00000549678 2 578 9 0 7 0.71 9 ENST00000549678 2 578 19 0 18
ENST00000331920 24 8057 3 4344 1 1.52 8 P:1 ENST00000331920 24 8662 2 4344 1 P:1
ENST00000375290 21 10631 1 1461 5 25.58 1 ENST00000375290 21 10631 1 1461 6
ENST00000429896 24 6563 5 3891 3 16.17 4 ENST00000429896 24 6563 7 3891 4
ENST00000550136 2 2388 7 0 7 24.42 2 ENST00000550136 2 2388 11 0 18
ENST00000430669 23 8232 2 4146 2 1.94 6 ENST00000430669 23 8232 3 4146 3
ENST00000468211 5 1254 8 552 6 19.56 3 ENST00000468211 5 1254 12 552 9
ENST00000488809 2 301 11 0 7 0.58 10 ENST00000488809 2 301 26 0 18
ENST00000553256 5 537 10 0 7 1.54 7 ENST00000553256 5 537 23 0 18
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000418258 24 7815 4 3891 3 0.34 11 ENST00000000000
ENST00000000000 ENST00000375271 8 1058 13 1058 8
ENST00000000000 ENST00000437951 24 7905 4 4341 2
ENST00000000000 ENST00000546820 7 864 16 522 10
ENST00000000000 ENST00000547615 4 525 24 0 18
ENST00000000000 ENST00000547672 7 881 15 522 10
ENST00000000000 ENST00000548379 5 548 21 0 18
ENST00000000000 ENST00000548420 3 553 20 200 16
ENST00000000000 ENST00000548945 2 243 27 0 18
ENST00000000000 ENST00000550914 5 630 18 240 15
ENST00000000000 ENST00000551425 2 241 28 0 18
ENST00000000000 ENST00000551623 4 366 25 51 17
ENST00000000000 ENST00000551630 4 539 22 276 14
ENST00000000000 ENST00000551845 7 809 17 522 10
ENST00000000000 ENST00000553011 7 1037 14 522 10
ENST00000000000 ENST00000687744 2 5236 8 0 18
ENST00000000000 ENST00000690194 24 7135 5 1371 7
ENST00000000000 ENST00000692981 23 7000 6 3891 4
ENST00000000000 ENST00000693534 10 4653 9 0 18

ENSG00000185920 PTCH1

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