TEXMST Gene Info

VPS13A

GTEx V9

Gene Name : vacuolar protein sorting 13 homolog A

GTEx V8

NCBI GeneID : 23230	NCBI : NM_033305.3	NCBI : NP_150648.2
Chromosome : 9	Strand : +
MANE Select : ENST00000360280	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	VPS13A	ENSG00000197969	77177534	77421537
GTEx V9	VPS13A	ENSG00000197969	77177352	77421541
Gencode v40	VPS13A	ENSG00000197969	77177444	77421537

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000376646	6	2262	7	333	7	1.10	8			ENST00000376646	6	2262	7	0	8
☉	ENST00000360280	72	15320	1	9525	1	46.30	1	☀	P:1	ENST00000360280	72	15227	1	9525	1	☀	P:1
	ENST00000484581	5	1155	9	333	7	2.14	5			ENST00000484581	5	1155	9	0	8
	ENST00000471439	3	510	11	0	10	1.21	7			ENST00000471439	3	510	11	0	8
	ENST00000419472	7	2781	5	1151	5	4.08	3			ENST00000419472	7	2781	5	1151	5
	ENST00000467124	3	324	13	125	9	0.23	10			ENST00000467124	3	324	13	125	7
	ENST00000355766	2	753	10	0	10	1.49	6			ENST00000355766	2	753	10	0	8
	ENST00000376636	71	11145	2	9408	2	0.05	11			ENST00000376636	71	11145	2	9408	2
	ENST00000539950	2	390	12	0	10	0.24	9			ENST00000539950	2	390	12	0	8
	ENST00000493341	12	2001	8	534	6	0.02	12			ENST00000493341	12	2001	8	534	6
	ENST00000423463	17	2702	6	0	10	0.02	13			ENST00000423463	17	2702	6	0	8

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000357409	69	9967	4	9288	3	39.31	2			ENST00000000000
	ENST00000376634	69	10269	3	9210	4	3.80	4			ENST00000000000
	ENST00000000000										ENST00000643348	69	9965	4	9288	3
	ENST00000000000										ENST00000645632	69	10086	3	9210	4

ENSG00000197969 VPS13A

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