TEXMST Gene Info

SPTLC1

GTEx V8

Gene Name : serine palmitoyltransferase long chain base subunit 1

GTEx V9

NCBI GeneID : 10558	NCBI : NM_006415.4	NCBI : NP_006406.1
Chromosome : 9	Strand : -
MANE Select : ENST00000262554	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SPTLC1	ENSG00000090054	92031147	92115413
GTEx V8	SPTLC1	ENSG00000090054	92031998	92115384
Gencode v40	SPTLC1	ENSG00000090054	92000086	92115413

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000262554	15	1894	1	1422	1	78.93	1	☀	P:1	ENST00000262554	15	2783	12	1422	4	☀	P:1
	ENST00000337841	6	946	2	432	2	11.01	2			ENST00000337841	6	946	23	432	7
	ENST00000469778	3	490	6	0	3	4.36	3			ENST00000469778	3	490	24	0	19
	ENST00000488921	5	686	5	0	3	3.66	4			ENST00000488921	5	1311	21	129	12
	ENST00000461132	3	808	4	0	3	1.00	5			ENST00000461132	3	1842	16	264	10
	ENST00000482632	8	837	3	0	3	0.88	6			ENST00000482632	14	1738	17	0	19
	ENST00000477888	3	359	7	0	3	0.16	7			ENST00000477888	3	359	25	0	19

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000642671	17	2289	14	69	16
	ENST00000000000										ENST00000643599	16	2042	15	69	16
	ENST00000000000										ENST00000644140	16	2792	11	432	7
	ENST00000000000										ENST00000646481	14	1727	18	69	16
	ENST00000000000										ENST00000646534	16	2982	6	435	5
	ENST00000000000										ENST00000686600	16	2968	7	1515	1
	ENST00000000000										ENST00000686799	16	3043	4	0	19
	ENST00000000000										ENST00000687427	16	3022	5	1515	1
	ENST00000000000										ENST00000687817	14	4920	1	435	5
	ENST00000000000										ENST00000687972	16	2807	10	1482	3
	ENST00000000000										ENST00000689261	14	2651	13	0	19
	ENST00000000000										ENST00000689401	17	3110	3	129	12
	ENST00000000000										ENST00000689423	16	1721	19	129	12
	ENST00000000000										ENST00000690095	17	3132	2	0	19
	ENST00000000000										ENST00000690139	16	2892	8	432	7
	ENST00000000000										ENST00000692363	4	1197	22	264	10
	ENST00000000000										ENST00000692458	15	2810	9	0	19
	ENST00000000000										ENST00000693147	15	1511	20	129	12

ENSG00000090054 SPTLC1

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