TEXMST Gene Info

Gene Name : leucine rich glioma inactivated 1

GTEx V9

NCBI GeneID : 9211	NCBI : NM_005097.4	NCBI : NP_005088.1
Chromosome : 10	Strand : +
MANE Select : ENST00000371418	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	LGI1	ENSG00000108231	93757936	93798159
GTEx V8	LGI1	ENSG00000108231	93757808	93806272
Gencode v40	LGI1	ENSG00000108231	93757839	93806272

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000371413	8	1247	20	876	4	21.41	1			ENST00000371413	8	1247	22	876	5
	ENST00000637689	8	1802	16	303	11	14.61	2			ENST00000637689	8	1802	18	303	11
	ENST00000635804	2	1415	19	0	20	12.95	3			ENST00000635804	2	1415	21	0	20
	ENST00000371418	8	2381	5	1674	1	12.21	4	☀	P:1	ENST00000371418	8	2239	9	1674	1	☀	P:1
	ENST00000478763	2	600	23	291	12	7.42	5			ENST00000478763	2	600	25	291	12
	ENST00000637347	7	1906	14	0	20	7.24	6			ENST00000637347	7	1906	16	0	20
	ENST00000630184	5	2936	2	507	8	5.07	7			ENST00000630184	5	2936	4	507	8
	ENST00000485458	3	409	26	0	20	3.52	8			ENST00000485458	6	5960	1	0	20
	ENST00000626307	3	5944	1	0	20	3.35	9			ENST00000626307	3	5944	2	0	20
	ENST00000629035	7	2251	7	1602	2	2.55	10			ENST00000629035	7	2251	8	1602	2
	ENST00000627420	6	2278	6	219	14	1.79	11			ENST00000627420	6	2278	7	219	14
	ENST00000464250	2	265	27	0	20	1.40	12			ENST00000464250	2	265	28	0	20
	ENST00000637611	8	2239	8	507	8	0.89	13			ENST00000637611	8	2239	9	507	8
	ENST00000626946	2	540	25	0	20	0.88	14			ENST00000626946	2	540	27	0	20
	ENST00000630047	6	1751	17	1530	3	0.82	15			ENST00000630047	6	1751	19	1530	3
	ENST00000635953	9	2430	4	846	6	0.71	16			ENST00000635953	9	2430	6	1149	4
	ENST00000636754	9	2200	9	219	14	0.68	17			ENST00000636754	9	2200	11	219	14
	ENST00000636775	3	2050	13	0	20	0.57	18			ENST00000636775	3	2050	15	0	20
	ENST00000637037	9	2456	3	711	7	0.42	19			ENST00000637037	9	2456	5	711	7
	ENST00000630487	7	1114	21	219	14	0.33	20			ENST00000630487	7	1114	23	219	14
	ENST00000638049	8	2072	12	159	19	0.28	21			ENST00000638049	8	2072	14	159	19
	ENST00000636946	8	1841	15	291	12	0.25	22			ENST00000636946	8	1841	17	291	12
	ENST00000627699	2	664	22	219	14	0.20	23			ENST00000627699	2	664	24	219	14
	ENST00000636232	8	2167	10	219	14	0.17	24			ENST00000636232	8	2167	12	219	14
	ENST00000637925	9	2165	11	456	10	0.17	25			ENST00000637925	9	2165	13	456	10
	ENST00000630412	4	549	24	0	20	0.06	26			ENST00000630412	4	549	26	0	20
	ENST00000636155	8	1618	18	864	5	0.06	27			ENST00000636155	8	1618	20	864	6

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000635725	2	100	29	0	20
	ENST00000000000										ENST00000636140	2	98	31	0	20
	ENST00000000000										ENST00000636683	2	100	29	0	20
	ENST00000000000										ENST00000676175	4	3727	3	0	20

ENSG00000108231 LGI1

TPM Log2 Log10