TEXMST Gene Info

Gene Name : SH3 domain and tetratricopeptide repeats 1

GTEx V9

NCBI GeneID : 54436	NCBI : NM_018986.5	NCBI : NP_061859.4
Chromosome : 4	Strand : +
MANE Select : ENST00000245105	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SH3TC1	ENSG00000125089	8199290	8241103
GTEx V8	SH3TC1	ENSG00000125089	8182071	8241803
Gencode v40	SH3TC1	ENSG00000125089	8182071	8241803

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000245105	18	4226	3	4011	1	27.77	1	☀	P:2	ENST00000245105	18	4303	3	4011	1	☀	P:2
	ENST00000502350	7	2258	6	0	11	23.45	2			ENST00000502350	7	2258	12	0	14
	ENST00000502559	4	3798	4	0	11	13.17	3			ENST00000502559	4	3798	10	0	14
	ENST00000515682	18	4293	2	231	8	8.35	4			ENST00000515682	18	4293	4	231	12
	ENST00000502669	15	3484	5	609	2	3.52	5			ENST00000502669	15	3484	11	609	9
	ENST00000507123	2	554	18	0	11	3.16	6			ENST00000507123	2	554	23	0	14
	ENST00000508183	4	1410	7	0	11	2.59	7			ENST00000508183	4	1410	13	0	14
	ENST00000511002	7	1124	8	304	6	2.28	8			ENST00000511002	7	1142	14	1014	8
	ENST00000512966	2	514	23	124	9	2.11	9			ENST00000512966	2	514	27	124	13
	ENST00000382521	3	829	9	342	4	2.03	10			ENST00000382521	3	829	16	342	11
	ENST00000509553	2	627	12	0	11	1.87	11			ENST00000509553	2	627	19	0	14
	ENST00000508641	5	551	19	551	3	1.86	12		A:2	ENST00000508641	17	3975	7	3783	4		A:2
	ENST00000512100	6	755	10	0	11	1.46	13			ENST00000512100	6	755	17	0	14
	ENST00000506360	16	5829	1	0	11	1.14	14			ENST00000506360	16	5829	1	0	14
	ENST00000507801	3	538	21	0	11	0.93	15			ENST00000507801	3	538	25	0	14
	ENST00000508438	2	515	22	0	11	0.92	16			ENST00000508438	2	515	26	0	14
	ENST00000457650	5	617	13	283	7	0.77	17		P:2	ENST00000457650	19	4345	2	4011	1		P:2
	ENST00000514274	3	565	15	0	11	0.77	18			ENST00000514274	3	565	21	0	14
	ENST00000507891	6	558	17	77	10	0.74	19			ENST00000507891	9	1021	15	540	10
	ENST00000510763	4	543	20	0	11	0.41	20			ENST00000510763	4	543	24	0	14
	ENST00000504223	2	698	11	0	11	0.27	21			ENST00000504223	2	698	18	0	14
	ENST00000513495	4	600	14	0	11	0.22	22			ENST00000513495	4	600	20	0	14
	ENST00000503284	5	560	16	0	11	0.09	23			ENST00000503284	5	560	22	0	14
	ENST00000504822	2	259	25	0	11	0.06	25			ENST00000504822	2	259	28	0	14

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000509119	5	509	24	317	5	0.07	24			ENST00000000000
	ENST00000000000										ENST00000682056	17	3961	8	3141	6
	ENST00000000000										ENST00000682862	17	4237	5	3255	5
	ENST00000000000										ENST00000684537	17	4024	6	1764	7
	ENST00000000000										ENST00000684698	17	3930	9	3930	3

ENSG00000125089 SH3TC1

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