TEXMST Gene Info

Gene Name : calcium voltage-gated channel subunit alpha1 A

GTEx V9

NCBI GeneID : 773	NCBI : NM_001127222.2	NCBI : NP_001120694.1
Chromosome : 19	Strand : -
MANE Select : ENST00000360228	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	CACNA1A	ENSG00000141837	13206442	13506479
GTEx V8	CACNA1A	ENSG00000141837	13206441	13633025
Gencode v40	CACNA1A	ENSG00000141837	13206441	13633025

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000587525	19	3765	19	2946	16	27.03	1			ENST00000587525	19	3765	19	2946	16
	ENST00000635988	3	2548	28	0	27	16.20	2			ENST00000635988	3	2548	28	0	27
	ENST00000636670	1	740	50	0	27	12.87	3			ENST00000636670	1	740	50	0	27
	ENST00000635895	47	8657	2	6786	13	7.54	4		A:2	ENST00000635895	47	8657	1	6786	13		A:2
	ENST00000635742	12	1910	32	0	27	5.71	5			ENST00000635742	12	1910	32	0	27
	ENST00000636473	16	1653	37	1653	18	3.99	7			ENST00000636473	16	1653	37	1653	18
	ENST00000636610	8	3011	23	0	27	3.06	8			ENST00000636610	8	3011	23	0	27
	ENST00000586190	2	459	59	0	27	2.96	9			ENST00000586190	2	459	59	0	27
	ENST00000636058	8	656	54	134	24	2.66	10			ENST00000636058	8	656	54	134	25
	ENST00000593267	3	567	56	0	27	1.44	11			ENST00000593267	3	567	56	0	27
	ENST00000360228	47	8627	4	7521	6	1.39	12	☀		ENST00000360228	47	8647	3	7521	5	☀
	ENST00000636549	48	6792	15	6792	11	1.33	13		A:2	ENST00000636549	48	6792	15	6792	11		A:2
	ENST00000637832	6	701	52	0	27	0.91	14			ENST00000637832	6	701	52	0	27
	ENST00000592864	3	1623	39	108	25	0.86	15			ENST00000592864	3	1623	39	270	21
	ENST00000636768	10	1034	45	228	23	0.76	16			ENST00000636768	10	1034	45	228	24
	ENST00000636074	1	1516	40	0	27	0.71	17			ENST00000636074	1	1516	40	0	27
	ENST00000573891	9	896	47	238	22	0.60	18			ENST00000573891	9	896	47	238	23
	ENST00000636022	5	552	57	0	27	0.57	19			ENST00000636022	5	552	57	0	27
	ENST00000637475	1	1975	30	0	27	0.36	20			ENST00000637475	1	1975	30	0	27
	ENST00000637117	3	1124	44	0	27	0.36	21			ENST00000637117	3	1124	44	0	27
	ENST00000587451	2	673	53	0	27	0.33	22			ENST00000587451	2	673	53	0	27
	ENST00000593160	8	1651	38	0	27	0.31	23			ENST00000593160	8	1651	38	0	27
	ENST00000636389	47	8137	7	6909	9	0.30	24		A:2	ENST00000636389	47	8137	6	6909	9		A:2
	ENST00000636816	6	1978	29	0	27	0.29	25			ENST00000636816	6	1978	29	0	27
	ENST00000637692	7	1245	43	0	27	0.27	26			ENST00000637692	7	1245	43	0	27
	ENST00000637168	1	2979	24	0	27	0.26	27			ENST00000637168	1	2979	24	0	27
	ENST00000637966	16	1887	34	0	27	0.25	28			ENST00000637966	16	1887	34	0	27
	ENST00000574822	8	806	49	0	27	0.21	29			ENST00000574822	8	806	49	0	27
	ENST00000637004	12	2829	26	0	27	0.19	30			ENST00000637004	12	2829	26	0	27
	ENST00000635917	11	1832	35	0	27	0.18	31			ENST00000635917	11	1832	35	0	27
	ENST00000590205	1	3340	21	0	27	0.17	32			ENST00000590205	1	3340	21	0	27
	ENST00000638009	47	8665	1	6786	13	0.15	33		A:2	ENST00000638009	47	8645	4	6786	13		A:2
	ENST00000637809	7	871	48	0	27	0.14	34			ENST00000637809	7	871	48	0	27
	ENST00000637485	2	5481	16	0	27	0.14	35			ENST00000637485	2	5481	16	0	27
	ENST00000574974	6	903	46	309	21	0.12	36			ENST00000574974	6	903	46	246	22
	ENST00000637927	47	6847	14	6789	12	0.11	37		A:2	ENST00000637927	47	6847	14	6789	12		A:2
	ENST00000637769	47	8648	3	7524	4	0.06	38		A:2	ENST00000637769	47	8648	2	7524	3		A:2
	ENST00000637616	3	3081	22	0	27	0.06	39			ENST00000637616	3	3081	22	0	27
	ENST00000637774	3	3381	20	0	27	0.05	40			ENST00000637774	3	3381	20	0	27
	ENST00000636974	11	1783	36	0	27	0.05	41			ENST00000636974	11	1783	36	0	27
	ENST00000637625	1	1890	33	0	27	0.04	42			ENST00000637625	1	1890	33	0	27
	ENST00000637297	6	637	55	637	20	0.04	43			ENST00000637297	6	637	55	637	20
	ENST00000636966	5	3938	17	0	27	0.04	44			ENST00000636966	5	3938	17	0	27
	ENST00000636984	2	1968	31	0	27	0.03	45			ENST00000636984	2	1968	31	0	27
	ENST00000635786	5	2840	25	0	27	0.03	46			ENST00000635786	5	2840	25	0	27
	ENST00000637777	8	728	51	79	26	0.03	47			ENST00000637777	8	728	51	79	26
	ENST00000637981	4	1346	42	0	27	0.02	48			ENST00000637981	4	1346	42	0	27
	ENST00000637276	46	7135	13	6750	15	0.01	49			ENST00000637276	46	7135	12	6750	15
	ENST00000638114	2	517	58	0	27	0.01	50			ENST00000638114	2	517	58	0	27
	ENST00000637952	1	3894	18	0	27	0.01	51			ENST00000637952	1	3894	18	0	27
	ENST00000637819	14	1378	41	1378	19	0.01	52			ENST00000637819	14	1378	41	1378	19
	ENST00000585802	18	2693	27	2646	17	0.00	53			ENST00000585802	18	2693	27	2646	17
	ENST00000637736	46	8340	6	7383	8	0.00	54			ENST00000637736	46	8340	5	7383	7
	ENST00000635727	47	7536	11	7524	4	0.00	55			ENST00000635727	47	7536	10	7524	3
	ENST00000636012	46	7500	12	7488	7	0.00	56			ENST00000636012	46	7500	11	7488	6
	ENST00000573710	47	7569	10	7527	3	0.00	57		A:2	ENST00000573710	47	7569	9	7527	2		A:2
	ENST00000637432	48	7809	9	6801	10	0.00	58		A:2	ENST00000637432	48	7809	8	6801	10		A:2
	ENST00000638029	48	7814	8	7539	1	0.00	59		P:3	ENST00000638029	48	7814	7	7539	1		P:3

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000614285	48	8410	5	7539	1	4.78	6			ENST00000000000
	ENST00000000000										ENST00000664864	49	6987	13	6987	8		A:2

ENSG00000141837 CACNA1A

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