GTEx V8
Gene Name : shortage in chiasmata 1
NCBI GeneID : 158401 NCBI : NM_001378211.1 NCBI : NP_001365140.1
Chromosome : 9 Strand : -
MANE Select : ENST00000682961 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE SHOC1 ENSG00000165181 111686171 111794937
GTEx V8 C9orf84 ENSG00000165181 111686172 111795008
Gencode v40 SHOC1 ENSG00000165181 111686170 111795008

Gencode v26 (GTEx V8) Gencode v40
V8
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000394779 24 5060 1 4218 3 31.38 1 A:2 ENST00000394779 24 5060 2 4218 4 A:2
ENST00000318737 26 4661 4 4335 1 20.17 2 P:4 ENST00000318737 26 4661 6 4335 2 P:4
ENST00000394777 23 4955 2 4113 4 19.83 3 A:2 ENST00000394777 23 4955 3 4113 5 A:2
ENST00000374287 25 4721 3 4335 1 18.29 4 P:4 ENST00000374287 25 4721 5 4335 2 P:4
ENST00000374283 12 1973 5 1467 5 10.33 5 A:2 ENST00000374283 12 1973 7 1467 7 A:2
Gencode v26 (GTEx V8) Gencode v40
V8
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000682074 3 481 11 138 11
ENST00000000000 ENST00000682571 6 566 9 253 10
ENST00000000000 ENST00000682672 4 566 9 378 9
ENST00000000000 ENST00000682961 28 5200 1 4527 1 A:2
ENST00000000000 ENST00000683745 5 595 8 493 8
ENST00000000000 ENST00000683944 27 4735 4 2862 6

ENSG00000165181 C9orf84

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