TEXMST Gene Info

Gene Name : FA complementation group A

GTEx V9

NCBI GeneID : 2175	NCBI : NM_000135.4	NCBI : NP_000126.2
Chromosome : 16	Strand : -
MANE Select : ENST00000389301	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	FANCA	ENSG00000187741	89737549	89816647
GTEx V8	FANCA	ENSG00000187741	89737548	89816657
Gencode v40	FANCA	ENSG00000187741	89726682	89816977

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000389301	43	5451	1	4368	1	18.45	1	☀	P:1	ENST00000389301	43	5452	3	4368	2	☀	P:1
	ENST00000562424	4	745	15	0	23	12.77	2			ENST00000562424	4	745	36	0	35
	ENST00000305699	11	1430	6	0	23	9.15	3			ENST00000305699	11	1430	22	0	35
	ENST00000564475	6	732	16	722	7	7.62	4			ENST00000564475	42	4686	6	4392	1
	ENST00000389302	11	1641	5	894	5	6.97	5			ENST00000389302	11	1641	18	894	11
	ENST00000561667	2	528	27	0	23	6.36	6			ENST00000561667	44	6113	1	1932	7
	ENST00000564870	5	460	30	460	14	5.86	7			ENST00000564870	5	460	44	460	25
	ENST00000567205	2	413	31	192	20	4.68	8			ENST00000567205	27	2772	12	2508	6
	ENST00000563318	6	605	24	232	19	2.96	9			ENST00000563318	6	605	42	232	30
	ENST00000561722	5	696	20	588	10	2.56	10			ENST00000561722	5	696	39	588	20
	ENST00000567510	6	461	29	306	18	2.36	11			ENST00000567510	26	3025	10	306	28
	ENST00000568626	9	727	17	505	12	2.10	12			ENST00000568626	9	727	37	505	23
	ENST00000568983	5	726	18	0	23	2.09	13			ENST00000568983	6	917	28	0	35
	ENST00000563673	10	1694	4	951	3	2.05	14			ENST00000563673	10	1694	17	951	9
	ENST00000568369	43	4601	2	4275	2	1.89	15			ENST00000568369	43	5464	2	4275	3
	ENST00000567883	5	650	21	0	23	1.60	16			ENST00000567883	5	650	40	0	35
	ENST00000567879	7	713	19	645	8	1.45	17			ENST00000567879	7	713	38	645	17
	ENST00000566409	2	395	32	125	22	1.28	18			ENST00000566409	2	395	45	125	33
	ENST00000567284	6	479	28	0	23	1.27	19			ENST00000567284	25	2499	13	0	35
	ENST00000567988	9	915	9	328	17	1.19	20			ENST00000567988	9	915	29	328	27
	ENST00000564969	3	850	11	0	23	1.10	21			ENST00000564969	3	850	32	0	35
	ENST00000561660	8	762	13	548	11	1.07	22			ENST00000561660	8	762	34	548	22
	ENST00000567621	8	618	23	377	15	0.76	23			ENST00000567621	13	1184	25	900	10
	ENST00000563510	6	633	22	154	21	0.54	24			ENST00000563510	6	633	41	154	31
	ENST00000566889	10	2201	3	0	23	0.45	25			ENST00000566889	10	2201	14	0	35
	ENST00000563767	2	578	25	0	23	0.42	26			ENST00000563767	13	1633	19	0	35
	ENST00000566133	2	761	14	0	23	0.36	27			ENST00000566133	2	761	35	0	35
	ENST00000563513	6	571	26	345	16	0.21	28			ENST00000563513	6	571	43	345	26
	ENST00000565582	9	812	12	633	9	0.16	29			ENST00000565582	9	812	33	633	18
	ENST00000534992	11	1088	7	909	4	0.13	30			ENST00000534992	11	1088	26	888	13
	ENST00000543736	10	1000	8	798	6	0.10	31			ENST00000543736	10	1000	27	798	16
	ENST00000567943	4	860	10	477	13	0.06	32			ENST00000567943	4	860	31	477	24

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000696274	36	4600	7	0	35
	ENST00000000000										ENST00000696275	43	4815	5	894	11
	ENST00000000000										ENST00000696276	30	3025	10	0	35
	ENST00000000000										ENST00000696277	17	1596	20	1395	8
	ENST00000000000										ENST00000696286	42	4422	9	4011	5
	ENST00000000000										ENST00000696287	41	4557	8	4263	4
	ENST00000000000										ENST00000696288	11	1699	16	300	29
	ENST00000000000										ENST00000696291	37	4969	4	582	21
	ENST00000000000										ENST00000696292	13	1818	15	147	32
	ENST00000000000										ENST00000696293	10	1482	21	66	34
	ENST00000000000										ENST00000696294	10	1426	23	834	14
	ENST00000000000										ENST00000696295	10	1423	24	831	15
	ENST00000000000										ENST00000696296	7	909	30	597	19

ENSG00000187741 FANCA

TPM Log2 Log10