GTEx V8
Gene Name : lipopolysaccharide induced TNF factor
NCBI GeneID : 9516 NCBI : NM_001136472.2 NCBI : NP_001129944.1
Chromosome : 16 Strand : -
MANE Select : ENST00000622633 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE LITAF ENSG00000189067 11547722 11586919
GTEx V8 LITAF ENSG00000189067 11547721 11636381
Gencode v40 LITAF ENSG00000189067 11547721 11636381

Gencode v26 (GTEx V8) Gencode v40
V8
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000622633 4 2467 2 486 2 83.97 1 P:1 ENST00000622633 4 2440 2 486 1 P:1
ENST00000339430 4 2356 3 486 2 4.65 2 P:1 ENST00000339430 4 2356 3 486 1 P:1
ENST00000570904 4 1118 6 486 2 3.74 3 P:1 ENST00000570904 4 1118 5 486 1 P:1
ENST00000413364 5 2292 4 459 9 2.36 4 ENST00000413364 5 2292 4 459 8
ENST00000574703 2 486 21 318 14 1.43 5 ENST00000574703 2 486 19 318 12
ENST00000571976 3 548 19 381 13 0.88 6 ENST00000571976 3 548 17 381 11
ENST00000571688 4 2632 1 486 2 0.79 7 P:1 ENST00000571688 4 2632 1 486 1 P:1
ENST00000573332 4 773 7 246 16 0.52 8 ENST00000573332 4 773 6 246 14
ENST00000574701 4 553 18 409 12 0.47 9 ENST00000574701 4 553 16 409 10
ENST00000571277 3 587 13 119 19 0.27 10 ENST00000571277 3 587 11 119 17
ENST00000574763 5 717 8 486 2 0.25 11 P:1 ENST00000574763 5 717 7 486 1 P:1
ENST00000575426 3 582 14 32 21 0.23 12 ENST00000575426 3 582 12 32 19
ENST00000570798 5 593 12 412 11 0.14 13 ENST00000570798 5 593 10 412 9
ENST00000576036 4 603 11 486 2 0.08 14 P:1 ENST00000576036 4 603 9 486 1 P:1
ENST00000571459 3 677 10 228 17 0.04 16 ENST00000571459 3 677 8 228 15
ENST00000571627 4 579 15 461 8 0.04 17 ENST00000571627 4 579 13 461 7
ENST00000574848 4 554 17 264 15 0.03 18 ENST00000574848 4 554 15 264 13
ENST00000576334 4 556 16 99 20 0.02 19 ENST00000576334 4 556 14 99 18
ENST00000572255 4 516 20 207 18 0.02 20 ENST00000572255 4 516 18 207 16
Gencode v26 (GTEx V8) Gencode v40
V8
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000381810 3 1527 5 687 1 0.07 15 ENST00000000000
ENST00000620789 4 692 9 459 9 0.00 21 ENST00000000000

ENSG00000189067 LITAF

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