TEXMST Gene Info

SCN8A

GTEx V8

Gene Name : sodium voltage-gated channel alpha subunit 8

GTEx V9

NCBI GeneID : 6334	NCBI : NM_001330260.2	NCBI : NP_001317189.1
Chromosome : 12	Strand : +
MANE Select : ENST00000627620	MANE Plus Clinical : ENST00000354534

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SCN8A	ENSG00000196876	51591233	51812864
GTEx V8	SCN8A	ENSG00000196876	51590265	51812864
Gencode v40	SCN8A	ENSG00000196876	51590265	51812864

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000545061	26	11433	2	5820	4	60.69	1			ENST00000545061	26	11433	3	5820	5
	ENST00000354534	27	11556	1	5943	2	29.72	2		P:4	ENST00000354534	27	11559	1	5943	2		P:4
	ENST00000546961	2	465	13	3	10	2.57	3			ENST00000546961	2	465	16	3	14
	ENST00000548086	9	1966	10	0	11	2.12	4			ENST00000548086	10	2075	13	1696	10
	ENST00000638820	12	3359	7	2280	6	1.67	5			ENST00000638820	12	3359	10	2280	8
	ENST00000551216	10	1627	11	1627	7	1.14	6			ENST00000551216	10	1627	14	1627	11
	ENST00000637709	9	2489	9	732	9	0.86	7			ENST00000637709	9	2489	12	732	13
	ENST00000627665	2	506	12	0	11	0.61	8			ENST00000627665	2	506	15	0	15
	ENST00000550891	16	3253	8	0	11	0.37	9			ENST00000550891	16	3253	11	0	15
	ENST00000636945	16	3578	6	962	8	0.20	10			ENST00000636945	16	3578	9	962	12
	ENST00000599343	26	5976	3	5976	1	0.05	11		A:1	ENST00000599343	26	5976	6	5976	1		A:1
	ENST00000355133	25	5820	5	5820	4	0.00	12			ENST00000355133	25	5820	7	5820	5
	ENST00000627620	26	5943	4	5943	2	0.00	13	☀	A:1	ENST00000627620	27	11559	1	5943	2	☀	A:1

Gencode v26 (GTEx V8)											Gencode v40
V8 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000636458	2	100	17	0	15
	ENST00000000000										ENST00000637540	2	93	18	0	15
	ENST00000000000										ENST00000662684	27	6930	4	5943	2		A:1
	ENST00000000000										ENST00000667214	12	4568	8	2280	8
	ENST00000000000										ENST00000668547	26	6876	5	5820	5

ENSG00000196876 SCN8A

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