TEXMST Gene Info

Gene Name : CD44 molecule (Indian blood group)

GTEx V8

NCBI GeneID : 960	NCBI : NM_000610.4	NCBI : NP_000601.3
Chromosome : 11	Strand : +
MANE Select : ENST00000428726	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	CD44	ENSG00000026508	35139171	35232402
GTEx V9	CD44	ENSG00000026508	35138869	35232402
Gencode v40	CD44	ENSG00000026508	35138881	35232402

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000263398	9	4589	1	1086	5	91.47	1		A:2	ENST00000263398	9	4288	2	1086	5		A:2
	ENST00000433892	12	2292	4	1482	3	1.96	2		A:2	ENST00000433892	12	2292	4	1482	3		A:2
	ENST00000528922	2	1319	8	0	24	1.11	3			ENST00000528922	2	1319	8	0	27
	ENST00000531118	4	877	11	0	24	0.98	4			ENST00000531118	4	877	11	0	27
	ENST00000532339	2	589	22	0	24	0.86	5			ENST00000532339	2	589	23	0	27
	ENST00000415148	17	2369	3	2100	2	0.69	6		P:4	ENST00000415148	17	2369	3	2100	2		P:4
	ENST00000525293	5	569	28	0	24	0.54	7			ENST00000525293	5	569	30	0	27
	ENST00000428726	18	3046	2	2229	1	0.42	8	☀	A:2	ENST00000428726	18	5431	1	2229	1	☀	A:2
	ENST00000526025	2	1052	9	237	23	0.31	9			ENST00000526025	2	1025	9	237	26
	ENST00000434472	10	1634	7	1290	4	0.28	10		A:2	ENST00000434472	10	1634	7	1290	4		A:2
	ENST00000442151	9	1825	5	883	7	0.27	11			ENST00000442151	9	1825	5	883	7
	ENST00000425428	8	1768	6	243	22	0.27	12			ENST00000425428	8	1768	6	243	25
	ENST00000534296	4	863	13	0	24	0.19	13			ENST00000534296	4	863	14	0	27
	ENST00000525209	5	574	26	0	24	0.18	14			ENST00000525209	5	574	28	0	27
	ENST00000531141	2	537	33	0	24	0.13	15			ENST00000531141	2	537	35	0	27
	ENST00000526669	6	870	12	621	14	0.10	16			ENST00000526669	6	870	13	621	15
	ENST00000525688	6	560	31	560	18	0.08	17			ENST00000525688	6	560	33	560	20
	ENST00000527326	4	718	18	0	24	0.04	18			ENST00000527326	4	718	19	0	27
	ENST00000534082	4	564	30	0	24	0.02	19			ENST00000534082	4	564	32	0	27
	ENST00000531110	6	749	15	749	9	0.01	20			ENST00000531110	7	806	16	806	10
	ENST00000528086	5	580	25	0	24	0.01	21			ENST00000528086	5	580	27	0	27
	ENST00000525348	3	568	29	0	24	0.01	22			ENST00000525348	3	568	31	0	27
	ENST00000525469	2	705	19	249	21	0.01	23			ENST00000525469	2	705	20	249	24
	ENST00000279452	8	862	14	862	8	0.00	24			ENST00000279452	8	862	15	862	8
	ENST00000525211	5	747	16	747	10	0.00	25			ENST00000525211	7	874	12	832	9
	ENST00000526553	5	571	27	571	17	0.00	26			ENST00000526553	6	571	29	571	19
	ENST00000528455	6	687	21	687	13	0.00	27			ENST00000528455	6	687	22	687	14
	ENST00000525241	2	440	35	0	24	0.00	28			ENST00000525241	2	440	37	0	27
	ENST00000278385	7	697	20	697	12	0.00	29			ENST00000278385	7	697	21	697	13
	ENST00000533222	5	581	24	581	16	0.00	30			ENST00000533222	5	581	26	581	18
	ENST00000278386	4	484	34	420	20	0.00	31			ENST00000278386	4	484	36	420	22
	ENST00000531873	5	584	23	584	15	0.00	32			ENST00000531873	5	584	25	584	17
	ENST00000525685	6	728	17	728	11	0.00	33			ENST00000525685	7	729	17	729	11
	ENST00000352818	8	1023	10	1023	6	0.00	34		A:2	ENST00000352818	8	1023	10	1023	6		A:2
	ENST00000527889	5	543	32	543	19	0.00	35			ENST00000527889	6	548	34	548	21

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000524922	4	352	38	352	23
	ENST00000000000										ENST00000526000	6	721	18	721	12
	ENST00000000000										ENST00000528672	5	586	24	586	16

ENSG00000026508 CD44

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