GTEx V9
Gene Name : sorting nexin 1
NCBI GeneID : 6642 NCBI : NM_003099.5 NCBI : NP_003090.2
Chromosome : 15 Strand : +
MANE Select : ENST00000559844 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE SNX1 ENSG00000028528 64095982 64144231
GTEx V9 SNX1 ENSG00000028528 64094122 64146090
Gencode v40 SNX1 ENSG00000028528 64094122 64146090

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000559844 15 1971 3 1569 2 27.16 2 P:1 ENST00000559844 15 8214 1 1569 2 P:1
ENST00000380285 15 8119 1 309 8 70.46 1 ENST00000380285 15 8119 2 309 9
ENST00000559961 2 712 9 0 10 0.63 4 ENST00000559961 2 712 10 0 12
ENST00000559401 2 408 11 0 10 0.04 10 ENST00000559401 2 408 12 0 12
ENST00000561026 13 1374 5 1374 3 0.06 9 ENST00000561026 13 1374 5 1374 3
ENST00000560829 14 1869 4 915 4 0.28 5 ENST00000560829 14 1869 4 915 4
ENST00000560260 9 1326 6 324 7 0.21 7 ENST00000560260 9 1326 6 324 7
ENST00000559061 7 550 10 57 9 0.01 11 ENST00000559061 7 550 11 57 11
ENST00000261889 15 3373 2 1674 1 0.75 3 ENST00000261889 15 3373 3 1674 1
ENST00000559389 7 753 8 334 6 0.16 8 ENST00000559389 7 753 9 334 6
ENST00000558040 4 774 7 387 5 0.25 6 ENST00000558040 4 774 8 387 5
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000559339 2 101 14 0 12
ENST00000000000 ENST00000560861 4 850 7 213 10
ENST00000000000 ENST00000625244 3 324 13 324 7

ENSG00000028528 SNX1

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