GTEx V9
Gene Name : collagen type IX alpha 2 chain
NCBI GeneID : 1298 NCBI : NM_001852.4 NCBI : NP_001843.1
Chromosome : 1 Strand : -
MANE Select : ENST00000372748 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE COL9A2 ENSG00000049089 40300489 40317286
GTEx V9 COL9A2 ENSG00000049089 40300486 40317816
Gencode v40 COL9A2 ENSG00000049089 40300488 40317813

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000372748 32 2862 2 2070 1 77.36 1 P:1 ENST00000372748 32 2852 2 2070 1 P:1
ENST00000482722 31 2887 1 0 3 9.74 2 ENST00000482722 31 2887 1 0 5
ENST00000417105 14 677 5 677 2 0.28 6 ENST00000417105 14 677 6 430 2
ENST00000490132 3 492 6 0 3 3.39 4 ENST00000490132 3 492 10 0 5
ENST00000461118 9 1158 3 0 3 8.52 3 ENST00000461118 9 1155 3 0 5
ENST00000488463 17 1005 4 0 3 0.14 7 ENST00000488463 14 843 4 0 5
ENST00000495948 2 423 7 0 3 0.58 5 ENST00000495948 2 423 11 0 5
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000372736 4 319 12 249 3
ENST00000000000 ENST00000427563 7 548 8 0 5
ENST00000000000 ENST00000466267 11 835 5 0 5
ENST00000000000 ENST00000496215 11 668 7 0 5
ENST00000000000 ENST00000642679 6 495 9 32 4

ENSG00000049089 COL9A2

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