TEXMST Gene Info

VPS35

GTEx V9

Gene Name : VPS35 retromer complex component

GTEx V8

NCBI GeneID : 55737	NCBI : NM_018206.6	NCBI : NP_060676.2
Chromosome : 16	Strand : -
MANE Select : ENST00000299138	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	VPS35	ENSG00000069329	46656132	46689178
GTEx V9	VPS35	ENSG00000069329	46656131	46689518
Gencode v40	VPS35	ENSG00000069329	46656131	46689518

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000299138	17	6790	1	2391	1	97.69	1	☀	P:1	ENST00000299138	17	6776	1	2391	1	☀	P:1
	ENST00000568784	17	4017	2	147	2	0.98	2			ENST00000568784	17	4017	3	147	2
	ENST00000569950	7	1096	3	0	5	0.72	3			ENST00000569950	7	1096	4	0	6
	ENST00000563984	2	775	4	0	5	0.27	4			ENST00000563984	2	775	5	0	6
	ENST00000565228	2	487	10	0	5	0.22	5			ENST00000565228	2	487	10	0	6
	ENST00000562420	4	740	6	0	5	0.05	6			ENST00000562420	4	740	7	0	6
	ENST00000568612	6	697	7	126	4	0.02	7			ENST00000568612	6	697	8	126	5
	ENST00000563884	2	759	5	0	5	0.02	8			ENST00000563884	2	759	6	0	6
	ENST00000568191	2	520	9	0	5	0.02	9			ENST00000568191	2	520	9	0	6

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000561713	5	589	8	144	3	0.01	10			ENST00000000000
	ENST00000000000										ENST00000568642	5	447	11	0	6
	ENST00000000000										ENST00000640313	2	141	12	141	4
	ENST00000000000										ENST00000647959	18	5054	2	144	3

ENSG00000069329 VPS35

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