GTEx V9
Gene Name : SMG6 nonsense mediated mRNA decay factor
NCBI GeneID : 23293 NCBI : NM_017575.5 NCBI : NP_060045.4
Chromosome : 17 Strand : -
MANE Select : ENST00000263073 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE SMG6 ENSG00000070366 2059843 2303785
GTEx V9 SMG6 ENSG00000070366 2059838 2303771
Gencode v40 SMG6 ENSG00000070366 2059838 2303785

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000263073 19 5960 1 4260 1 91.00 1 P:1 ENST00000263073 19 5974 1 4260 1 P:1
ENST00000536871 11 1865 5 1536 2 1.83 2 ENST00000536871 11 1865 6 1536 2
ENST00000575663 5 574 9 487 5 1.36 3 ENST00000575663 5 574 13 487 7
ENST00000575338 3 546 14 0 10 1.27 4 ENST00000575338 3 546 19 0 13
ENST00000570668 4 547 13 357 8 1.21 5 ENST00000570668 4 547 18 357 11
ENST00000573166 7 4236 2 0 10 0.95 6 ENST00000573166 7 4236 2 0 13
ENST00000572369 4 689 6 416 6 0.91 7 ENST00000572369 4 689 8 416 8
ENST00000572205 4 551 12 347 9 0.42 8 ENST00000572205 4 551 17 347 12
ENST00000570874 2 533 15 0 10 0.34 9 ENST00000570874 2 533 20 0 13
ENST00000573827 5 601 8 0 10 0.26 10 ENST00000573827 5 601 10 0 13
ENST00000575176 4 557 10 372 7 0.16 11 ENST00000575176 4 557 15 372 9
ENST00000570756 6 2426 4 0 10 0.14 12 ENST00000570756 6 2426 4 0 13
ENST00000575454 5 652 7 624 4 0.10 13 ENST00000575454 5 652 9 624 4
ENST00000354901 12 3473 3 1536 2 0.04 14 ENST00000354901 12 3473 3 1536 2
ENST00000573153 4 552 11 0 10 0.02 15 ENST00000573153 4 552 16 0 13
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000570606 4 572 14 369 10
ENST00000000000 ENST00000570659 6 592 11 489 6
ENST00000000000 ENST00000571442 5 588 12 494 5
ENST00000000000 ENST00000574501 1 2419 5 0 13
ENST00000000000 ENST00000576218 6 902 7 0 13

ENSG00000070366 SMG6

Copyright © 2022 TDL Lab. All Rights Reserved.