TEXMST Gene Info

RBFOX1

GTEx V9

Gene Name : RNA binding fox-1 homolog 1

GTEx V8

NCBI GeneID : 54715	NCBI : NM_018723.4	NCBI : NP_061193.2
Chromosome : 16	Strand : +
MANE Select : ENST00000550418	MANE Plus Clinical : ENST00000355637

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	RBFOX1	ENSG00000078328	6019024	7713340
GTEx V9	RBFOX1	ENSG00000078328	6019093	7713338
Gencode v40	RBFOX1	ENSG00000078328	5239801	7713340

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000355637	14	3321	5	1188	7	37.30	1			ENST00000355637	14	4062	12	1188	11
	ENST00000547372	17	3524	4	1401	1	19.54	2			ENST00000547372	17	3524	22	1401	2
	ENST00000311745	13	3268	6	1257	3	12.63	3		P:4	ENST00000311745	13	3268	23	1212	5		P:4
	ENST00000550418	16	4775	1	1194	5	12.19	4	☀	A:1	ENST00000550418	16	4884	1	1194	7	☀	A:1
	ENST00000551752	11	974	14	789	13	3.30	5			ENST00000551752	11	974	33	789	24
	ENST00000569889	3	503	19	0	16	2.57	6			ENST00000569889	3	503	38	0	28
	ENST00000547427	5	557	17	0	16	2.39	7			ENST00000547427	5	557	36	0	28
	ENST00000553186	15	2196	7	1113	12	2.25	8			ENST00000553186	15	2196	25	1113	19
	ENST00000620507	12	4018	3	1128	11	1.85	9			ENST00000620507	12	4018	14	1128	16
	ENST00000552089	15	1430	13	1176	9	1.55	10			ENST00000552089	15	1430	32	1176	12
	ENST00000547338	14	1513	12	1194	5	1.23	11		A:1	ENST00000547338	14	1513	31	1194	7		A:1
	ENST00000436368	13	1530	11	1179	8	1.03	12			ENST00000436368	13	1530	30	1134	14
	ENST00000547605	12	1811	8	786	14	0.49	13			ENST00000547605	12	1811	26	786	25
	ENST00000570188	4	568	16	0	16	0.46	14			ENST00000570188	4	568	35	0	28
	ENST00000340209	13	4099	2	1209	4	0.33	15			ENST00000340209	13	4099	11	1209	6
	ENST00000535565	14	1599	10	1143	10	0.31	16			ENST00000535565	14	1599	28	1143	13
	ENST00000422070	16	1684	9	1278	2	0.18	17			ENST00000422070	16	1684	27	1278	3
	ENST00000548749	4	538	18	0	16	0.15	18			ENST00000548749	4	538	37	0	28
	ENST00000570626	5	725	15	567	15	0.13	19			ENST00000570626	13	3709	20	1119	18
	ENST00000564850	3	293	20	0	16	0.11	20			ENST00000564850	3	293	40	0	28

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000567470	4	420	39	224	27
	ENST00000000000										ENST00000569895	7	829	34	0	28
	ENST00000000000										ENST00000585867	3	1580	29	606	26
	ENST00000000000										ENST00000641259	20	3651	21	1749	1
	ENST00000000000										ENST00000674626	15	4501	4	1065	20
	ENST00000000000										ENST00000674792	14	4002	15	1065	20
	ENST00000000000										ENST00000674859	8	4378	6	0	28
	ENST00000000000										ENST00000675077	8	4320	8	0	28
	ENST00000000000										ENST00000675140	5	2960	24	0	28
	ENST00000000000										ENST00000675242	8	4323	7	0	28
	ENST00000000000										ENST00000675459	17	4126	10	1125	17
	ENST00000000000										ENST00000675562	14	3898	17	1248	4
	ENST00000000000										ENST00000675653	16	4019	13	1194	7		A:1
	ENST00000000000										ENST00000675725	9	4796	2	0	28
	ENST00000000000										ENST00000675842	16	4254	9	1194	7		A:1
	ENST00000000000										ENST00000675904	14	4547	3	0	28
	ENST00000000000										ENST00000676218	13	3835	19	1056	22
	ENST00000000000										ENST00000676253	13	4496	5	0	28
	ENST00000000000										ENST00000682918	13	3851	18	1050	23
	ENST00000000000										ENST00000683326	14	3962	16	1131	15

ENSG00000078328 RBFOX1

TPM Log2 Log10

Copyright © 2022 TDL Lab. All Rights Reserved.