TEXMST Gene Info

Gene Name : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2

GTEx V8

NCBI GeneID : 6595	NCBI : NM_003070.5	NCBI : NP_003061.3
Chromosome : 9	Strand : +
MANE Select : ENST00000349721	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SMARCA2	ENSG00000080503	2015347	2193620
GTEx V9	SMARCA2	ENSG00000080503	1980289	2193624
Gencode v40	SMARCA2	ENSG00000080503	1980289	2193624

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000636157	17	3211	11	0	38	0.08	40			ENST00000636157	17	3211	11	0	49
☉	ENST00000324954	7	1781	17	747	18	19.27	1			ENST00000324954	7	1781	18	747	19
	ENST00000382194	33	5679	7	4719	3	0.20	35		A:2	ENST00000382194	33	5679	7	4719	3		A:2
	ENST00000636367	10	1889	15	297	32	0.81	22			ENST00000636367	10	1889	16	297	35
	ENST00000357248	33	5855	4	4719	3	0.54	26		A:2	ENST00000357248	33	5855	4	4719	3		A:2
	ENST00000639760	4	2531	12	403	31	3.61	7			ENST00000639760	6	2942	12	814	14
	ENST00000637103	5	5657	8	867	7	15.29	2			ENST00000637103	5	5657	8	867	7
	ENST00000635129	5	582	41	0	38	0.04	43			ENST00000635129	5	582	47	0	49
	ENST00000637806	4	7061	1	840	9	0.31	32			ENST00000637806	4	7061	1	840	9
	ENST00000635590	9	1843	16	297	32	8.91	4			ENST00000635590	9	1843	17	297	35
	ENST00000382185	8	1584	18	831	12	1.88	14			ENST00000382185	8	1584	19	831	12
	ENST00000417599	8	980	22	831	12	0.76	23			ENST00000417599	8	980	24	831	12
	ENST00000457226	4	736	33	579	26	1.79	15			ENST00000457226	4	736	37	579	30
	ENST00000450198	33	5602	9	4545	5	1.20	19			ENST00000450198	33	5602	9	4545	5
	ENST00000382183	7	1178	19	711	19	1.07	21			ENST00000382183	7	1178	21	711	22
	ENST00000634271	5	572	43	0	38	0.57	24			ENST00000634271	5	572	49	0	49
	ENST00000302401	8	2242	14	837	11	9.56	3			ENST00000302401	8	2242	15	837	11
	ENST00000634403	2	497	46	0	38	0.08	41			ENST00000634403	2	497	52	0	49
	ENST00000636559	4	6853	2	840	9	1.60	18			ENST00000636559	4	6853	2	840	9
	ENST00000635273	6	672	36	0	38	0.36	30			ENST00000635273	6	672	41	0	49
	ENST00000634760	33	5847	5	4287	6	2.67	9			ENST00000634760	33	5847	5	4287	6
	ENST00000382203	34	5867	3	4773	1	2.40	10		P:3	ENST00000382203	34	5867	3	4773	1		P:3
	ENST00000423555	7	834	26	685	22	4.14	6			ENST00000423555	7	834	28	685	25
	ENST00000634343	5	792	28	695	20	6.15	5			ENST00000634343	5	792	30	695	23
	ENST00000349721	34	5761	6	4773	1	0.06	42	☀	P:3	ENST00000349721	34	5748	6	4773	1	☀	P:3
	ENST00000635030	4	571	44	0	38	0.25	34			ENST00000635030	4	571	50	0	49
	ENST00000439732	4	755	31	646	23	0.13	37			ENST00000439732	4	755	33	646	27
	ENST00000636903	5	2471	13	867	7	1.10	20			ENST00000636903	5	2471	14	867	7
	ENST00000635739	26	4272	10	0	38	0.11	39			ENST00000635739	26	4272	10	0	49
	ENST00000634772	7	810	27	810	14	0.19	36			ENST00000634772	7	810	29	810	15
	ENST00000635659	6	762	29	176	36	0.32	31			ENST00000635659	6	762	31	176	40
	ENST00000635388	6	711	35	606	24	0.37	29			ENST00000635388	6	711	39	606	28
	ENST00000416751	6	633	38	578	27	0.29	33			ENST00000416751	6	633	44	578	31
	ENST00000635530	7	712	34	687	21	0.03	44			ENST00000635530	7	712	38	687	24
	ENST00000635397	3	578	42	0	38	0.56	25			ENST00000635397	3	578	48	0	49
	ENST00000634688	5	897	25	447	30	2.79	8			ENST00000634688	5	897	27	447	34
	ENST00000634781	7	1106	21	783	15	2.00	11			ENST00000634781	7	1106	23	783	16
	ENST00000634536	3	556	45	0	38	0.53	27			ENST00000634536	3	556	51	0	49
	ENST00000634706	5	630	39	508	29	0.01	45			ENST00000634706	5	630	45	508	33
	ENST00000382186	9	955	23	765	16	1.95	12			ENST00000382186	9	955	25	765	17
	ENST00000635133	6	758	30	601	25	1.65	17			ENST00000635133	6	758	32	601	29
	ENST00000637383	2	162	47	29	37	0.48	28			ENST00000637383	2	162	55	29	44
	ENST00000634989	9	1118	20	297	32	1.78	16			ENST00000634989	9	1118	22	297	35
	ENST00000452193	6	750	32	548	28	1.95	13			ENST00000452193	6	750	34	548	32
	ENST00000635688	2	616	40	204	35	0.01	47			ENST00000635688	2	616	46	204	38
	ENST00000491574	3	645	37	0	38	0.12	38			ENST00000491574	3	645	42	0	49
	ENST00000634931	8	939	24	765	16	0.01	46			ENST00000634931	8	939	26	765	17

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000634287	3	424	53	186	39
	ENST00000000000										ENST00000634338	8	740	36	733	21
	ENST00000000000										ENST00000634435	8	744	35	735	20
	ENST00000000000										ENST00000634925	12	1582	20	0	49
	ENST00000000000										ENST00000635185	7	683	40	683	26
	ENST00000000000										ENST00000635226	1	640	43	174	41
	ENST00000000000										ENST00000635392	3	291	54	115	42
	ENST00000000000										ENST00000636221	2	100	58	14	46
	ENST00000000000										ENST00000636233	2	100	58	0	49
	ENST00000000000										ENST00000636501	2	100	58	0	49
	ENST00000000000										ENST00000636758	2	100	58	0	49
	ENST00000000000										ENST00000636916	3	111	57	111	43
	ENST00000000000										ENST00000636969	2	100	58	0	49
	ENST00000000000										ENST00000637097	2	100	58	9	47
	ENST00000000000										ENST00000637134	2	100	58	8	48
	ENST00000000000										ENST00000637352	2	128	56	20	45
	ENST00000000000										ENST00000637371	2	99	66	0	49
	ENST00000000000										ENST00000637856	3	100	58	0	49
	ENST00000000000										ENST00000638139	15	2675	13	0	49

ENSG00000080503 SMARCA2

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