TEXMST Gene Info

USP40

GTEx V9

Gene Name : ubiquitin specific peptidase 40

GTEx V8

NCBI GeneID : 55230	NCBI : NM_001365479.2	NCBI : NP_001352408.1
Chromosome : 2	Strand : -
MANE Select : ENST00000678225	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	USP40	ENSG00000085982	233475526	233566782
GTEx V9	USP40	ENSG00000085982	233475519	233566782
Gencode v40	USP40	ENSG00000085982	233475519	233566782

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000483519	6	2722	3	0	8	12.18	4			ENST00000483519	6	2722	5	0	11
	ENST00000251722	32	5692	1	3708	1	17.97	3		A:1	ENST00000251722	32	5692	2	3708	3		A:1
☉	ENST00000430158	10	1047	5	740	3	29.89	1			ENST00000430158	10	1047	7	740	5
	ENST00000483216	6	641	10	0	8	0.25	12			ENST00000483216	6	641	12	0	11
	ENST00000427112	31	3744	2	3708	1	0.09	15		A:1	ENST00000427112	31	3744	4	3708	3		A:1
	ENST00000450940	7	670	8	292	7	1.78	7			ENST00000450940	7	670	10	292	10
	ENST00000427947	6	794	7	0	8	0.50	9			ENST00000427947	6	794	9	0	11
	ENST00000409945	6	1946	4	492	4	4.31	6			ENST00000409945	6	1946	6	492	6
	ENST00000496298	5	665	9	0	8	5.29	5			ENST00000496298	5	665	11	0	11
	ENST00000484528	5	933	6	0	8	26.02	2			ENST00000484528	5	933	8	0	11
	ENST00000452724	3	453	14	297	5	0.34	11			ENST00000452724	3	453	16	297	8
	ENST00000464956	2	185	15	0	8	0.59	8			ENST00000464956	2	185	18	0	11
	ENST00000473191	5	590	12	0	8	0.43	10			ENST00000473191	5	590	14	0	11
	ENST00000485943	5	568	13	0	8	0.15	14			ENST00000485943	5	568	15	0	11
	ENST00000443711	4	628	11	297	5	0.23	13			ENST00000443711	4	628	13	297	8

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000450966	31	5616	3	3744	1
	ENST00000000000										ENST00000454354	3	348	17	348	7
	ENST00000000000										ENST00000678225	32	5695	1	3711	2	☀	P:3

ENSG00000085982 USP40

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