TEXMST Gene Info

Gene Name : calpain 3

GTEx V8

NCBI GeneID : 825	NCBI : NM_000070.3	NCBI : NP_000061.1
Chromosome : 15	Strand : +
MANE Select : ENST00000397163	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	CAPN3	ENSG00000092529	42359501	42412317
GTEx V9	CAPN3	ENSG00000092529	42359499	42412318
Gencode v40	CAPN3	ENSG00000092529	42359497	42412949

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000337571	9	1271	9	471	7	36.48	1			ENST00000337571	9	1304	29	471	16
	ENST00000466222	8	1934	6	0	13	10.99	3			ENST00000466222	7	1366	25	0	45
	ENST00000397200	13	1643	7	930	5	0.17	12			ENST00000397200	13	1643	18	930	5
	ENST00000565173	2	555	15	0	13	0.25	11			ENST00000565173	2	879	43	0	45
	ENST00000397204	10	1237	10	471	7	1.13	8			ENST00000397204	10	1263	32	471	16
	ENST00000569136	11	1029	11	471	7	4.01	6			ENST00000569136	11	1148	35	471	16
	ENST00000397163	24	3228	1	2466	1	29.11	2	☀	P:2	ENST00000397163	24	3315	4	2466	1	☀	P:2
	ENST00000318023	23	3172	2	2322	3	3.41	7		A:2	ENST00000318023	23	3172	5	2322	3		A:2
	ENST00000561817	9	915	12	576	6	8.51	4			ENST00000561817	9	915	39	576	10
	ENST00000567817	5	711	14	282	12	0.49	9			ENST00000567817	5	718	52	255	41
	ENST00000356316	9	1291	8	471	7	5.01	5			ENST00000356316	9	1291	30	471	16
	ENST00000349748	21	2955	3	2190	4	0.35	10			ENST00000349748	21	3045	7	2190	4
	ENST00000565274	10	734	13	333	11	0.04	13			ENST00000565274	10	734	50	333	35
	ENST00000357568	23	2669	4	2448	2	0.01	15			ENST00000357568	23	3130	6	2448	2
	ENST00000638141	21	2358	5	0	13	0.03	14			ENST00000638141	21	2745	8	0	45

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000562199	7	469	58	330	37
	ENST00000000000										ENST00000564503	9	593	55	509	14
	ENST00000000000										ENST00000565559	9	711	53	473	15
	ENST00000000000										ENST00000567071	7	563	56	563	12
	ENST00000000000										ENST00000568153	6	769	49	332	36
	ENST00000000000										ENST00000569827	10	908	41	767	6
	ENST00000000000										ENST00000673646	13	1027	38	252	43
	ENST00000000000										ENST00000673658	5	1166	34	0	45
	ENST00000000000										ENST00000673684	4	521	57	0	45
	ENST00000000000										ENST00000673687	3	1071	37	0	45
	ENST00000000000										ENST00000673692	8	861	44	471	16
	ENST00000000000										ENST00000673705	7	2239	10	255	41
	ENST00000000000										ENST00000673743	11	1526	21	369	34
	ENST00000000000										ENST00000673750	9	4195	3	576	10
	ENST00000000000										ENST00000673771	10	1418	23	471	16
	ENST00000000000										ENST00000673774	5	1724	14	0	45
	ENST00000000000										ENST00000673813	4	1102	36	0	45
	ENST00000000000										ENST00000673839	10	897	42	434	33
	ENST00000000000										ENST00000673851	11	1688	17	471	16
	ENST00000000000										ENST00000673854	8	6433	1	0	45
	ENST00000000000										ENST00000673886	11	2078	11	471	16
	ENST00000000000										ENST00000673890	10	1416	24	471	16
	ENST00000000000										ENST00000673893	3	411	59	132	44
	ENST00000000000										ENST00000673928	11	1437	22	471	16
	ENST00000000000										ENST00000673936	10	1317	28	471	16
	ENST00000000000										ENST00000673939	9	1288	31	300	38
	ENST00000000000										ENST00000673950	8	913	40	0	45
	ENST00000000000										ENST00000673978	11	1623	19	609	8
	ENST00000000000										ENST00000673987	11	1350	26	300	38
	ENST00000000000										ENST00000674011	10	1348	27	300	38
	ENST00000000000										ENST00000674012	2	796	47	0	45
	ENST00000000000										ENST00000674018	10	1691	16	471	16
	ENST00000000000										ENST00000674027	7	799	46	0	45
	ENST00000000000										ENST00000674041	8	725	51	554	13
	ENST00000000000										ENST00000674052	10	2354	9	690	7
	ENST00000000000										ENST00000674064	3	794	48	0	45
	ENST00000000000										ENST00000674093	9	1984	12	471	16
	ENST00000000000										ENST00000674119	9	1170	33	471	16
	ENST00000000000										ENST00000674130	2	705	54	0	45
	ENST00000000000										ENST00000674135	9	801	45	604	9
	ENST00000000000										ENST00000674139	9	4597	2	471	16
	ENST00000000000										ENST00000674140	2	1577	20	0	45
	ENST00000000000										ENST00000674146	12	1733	13	471	16
	ENST00000000000										ENST00000674149	11	1707	15	471	16

ENSG00000092529 CAPN3

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