GTEx V9
Gene Name : serine palmitoyltransferase long chain base subunit 2
NCBI GeneID : 9517 NCBI : NM_004863.4 NCBI : NP_004854.1
Chromosome : 14 Strand : -
MANE Select : ENST00000216484 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE SPTLC2 ENSG00000100596 77505997 77616637
GTEx V9 SPTLC2 ENSG00000100596 77505996 77616773
Gencode v40 SPTLC2 ENSG00000100596 77505996 77616637

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000216484 12 8170 1 1689 1 99.63 1 P:1 ENST00000216484 12 8034 1 1689 1 P:1
ENST00000556607 4 460 4 123 3 0.19 2 ENST00000556607 4 460 10 123 3
ENST00000554901 9 1518 2 1222 2 0.14 3 ENST00000554901 9 1518 6 1222 2
ENST00000557566 2 510 3 0 4 0.04 4 ENST00000557566 2 510 9 0 4
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000554365 3 604 8 0 4
ENST00000000000 ENST00000686627 5 7002 4 0 4
ENST00000000000 ENST00000686959 2 2887 5 0 4
ENST00000000000 ENST00000687688 9 7733 2 0 4
ENST00000000000 ENST00000691887 3 933 7 0 4
ENST00000000000 ENST00000692906 11 7702 3 0 4

ENSG00000100596 SPTLC2

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