TEXMST Gene Info

CXCL12

GTEx V9

Gene Name : C-X-C motif chemokine ligand 12

GTEx V8

NCBI GeneID : 6387	NCBI : NM_199168.4	NCBI : NP_954637.1
Chromosome : 10	Strand : -
MANE Select : ENST00000343575	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	CXCL12	ENSG00000107562	44377067	44385097
GTEx V9	CXCL12	ENSG00000107562	44370164	44386493
Gencode v40	CXCL12	ENSG00000107562	44370164	44386493

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000343575	3	1857	2	270	5	83.54	1	☀	P:4	ENST00000343575	3	1928	2	270	6	☀	P:4
	ENST00000374429	4	3532	1	282	4	15.29	2		A:1	ENST00000374429	4	3532	1	282	5		A:1
	ENST00000374426	4	470	7	360	2	0.74	3		A:2	ENST00000374426	4	470	7	360	2		A:2
	ENST00000395794	4	1052	3	423	1	0.40	4			ENST00000395794	4	1052	3	423	1
	ENST00000496375	3	803	4	0	6	0.02	5			ENST00000496375	3	803	4	0	7
	ENST00000488591	2	596	6	0	6	0.01	6			ENST00000488591	2	596	6	0	7
	ENST00000395793	3	665	5	312	3	0.00	7			ENST00000395793	3	665	5	312	3

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000395795	3	404	8	312	3

ENSG00000107562 CXCL12

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