TEXMST Gene Info

RAB5C

GTEx V9

Gene Name : RAB5C, member RAS oncogene family

GTEx V8

NCBI GeneID : 5878	NCBI : NM_004583.4	NCBI : NP_004574.2
Chromosome : 17	Strand : -
MANE Select : ENST00000346213	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	RAB5C	ENSG00000108774	42124979	42154989
GTEx V9	RAB5C	ENSG00000108774	42124975	42155044
Gencode v40	RAB5C	ENSG00000108774	42124977	42155044

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000346213	6	1671	2	651	2	95.63	1	☀	P:1	ENST00000346213	6	1640	2	651	2	☀	P:1
	ENST00000546881	3	608	4	0	7	1.48	2			ENST00000546881	3	608	4	0	8
	ENST00000551338	3	560	6	453	4	1.15	3			ENST00000551338	3	560	6	453	4
	ENST00000550504	3	583	5	275	5	0.70	4			ENST00000550504	3	583	5	275	6
	ENST00000550406	4	500	8	223	6	0.45	5			ENST00000550406	4	500	9	223	7
	ENST00000393860	7	1912	1	651	2	0.34	6		P:1	ENST00000393860	7	1912	1	651	2		P:1
	ENST00000550013	2	555	7	0	7	0.23	7			ENST00000550013	2	555	7	0	8
	ENST00000547517	7	1167	3	750	1	0.02	8			ENST00000547517	7	1167	3	750	1

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000552162	4	551	8	372	5

ENSG00000108774 RAB5C

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