GTEx V9
Gene Name : collagen type XII alpha 1 chain
NCBI GeneID : 1303 NCBI : NM_004370.6 NCBI : NP_004361.3
Chromosome : 6 Strand : -
MANE Select : ENST00000322507 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE COL12A1 ENSG00000111799 75084326 75206053
GTEx V9 COL12A1 ENSG00000111799 75084325 75206051
Gencode v40 COL12A1 ENSG00000111799 75084325 75206267

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000322507 66 11723 1 9192 1 63.29 1 P:2 ENST00000322507 66 11725 1 9192 1 P:2
ENST00000425443 22 3135 6 2271 6 19.88 2 ENST00000425443 22 3135 7 2271 5
ENST00000345356 51 5886 5 5700 4 10.06 3 ENST00000345356 51 5886 4 5700 4
ENST00000483888 65 9637 3 9189 2 2.23 4 A:1 ENST00000483888 65 9637 2 9189 2 A:1
ENST00000493109 6 794 9 624 8 1.93 5 ENST00000493109 6 794 11 624 7
ENST00000511023 8 571 10 0 9 1.33 6 ENST00000511023 8 571 12 0 8
ENST00000474564 3 499 11 0 9 0.74 7 ENST00000474564 3 499 13 0 8
ENST00000486533 5 1554 8 0 9 0.49 8 ENST00000486533 5 1554 10 0 8
ENST00000416123 63 8964 4 8964 3 0.02 10 ENST00000416123 63 8964 3 8964 3
ENST00000419671 15 1914 7 1914 7 0.02 11 ENST00000419671 15 1914 9 1914 6
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000615798 67 11579 2 5625 5 0.02 9 ENST00000000000
ENST00000000000 ENST00000680102 2 5813 5 0 8
ENST00000000000 ENST00000680981 4 2782 8 0 8
ENST00000000000 ENST00000681086 2 3156 6 0 8

ENSG00000111799 COL12A1

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