TEXMST Gene Info

Gene Name : coiled-coil domain containing 88A

GTEx V8

NCBI GeneID : 55704	NCBI : NM_001365480.1	NCBI : NP_001352409.1
Chromosome : 2	Strand : -
MANE Select : ENST00000436346	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	CCDC88A	ENSG00000115355	55287842	55419856
GTEx V9	CCDC88A	ENSG00000115355	55287841	55419921
Gencode v40	CCDC88A	ENSG00000115355	55287841	55419895

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000468534	2	536	12	0	11	40.75	1			ENST00000468534	7	2074	41	0	40
☉	ENST00000412148	16	2880	9	2667	6	29.18	2			ENST00000412148	16	2974	31	2667	19
	ENST00000426576	17	4500	5	3609	5	10.93	3			ENST00000426576	17	5120	19	3609	12
	ENST00000263630	32	9667	2	5532	3	5.84	4		P:4	ENST00000263630	32	9699	2	5532	4		P:4
	ENST00000413716	34	9586	3	5391	4	5.48	5			ENST00000413716	34	9545	3	5394	6
	ENST00000471947	3	3713	7	0	11	5.11	6			ENST00000471947	3	3707	25	309	35
	ENST00000430086	7	582	11	442	10	1.03	7			ENST00000430086	7	582	64	0	40
	ENST00000476903	2	419	13	0	11	0.49	8			ENST00000476903	2	419	67	166	37
	ENST00000444458	7	4236	6	1124	9	0.47	9			ENST00000444458	7	4236	22	1124	25
	ENST00000436346	33	9811	1	5616	1	0.19	11	☀	A:1	ENST00000436346	33	9751	1	5616	1	☀	A:1
	ENST00000456975	13	2208	10	2208	8	0.10	12			ENST00000456975	13	2208	37	2208	21
	ENST00000336838	33	9505	4	5613	2	0.06	13		A:1	ENST00000336838	33	9505	4	5613	3		A:1

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000621814	16	3089	8	2226	7	0.37	10			ENST00000000000
	ENST00000000000										ENST00000474059	4	581	65	0	40
	ENST00000000000										ENST00000642200	33	6958	10	5616	1		A:1
	ENST00000000000										ENST00000642266	3	1777	50	0	40
	ENST00000000000										ENST00000642328	3	792	63	0	40
	ENST00000000000										ENST00000642514	1	2029	43	0	40
	ENST00000000000										ENST00000642563	18	6401	12	3327	15
	ENST00000000000										ENST00000642784	2	1270	55	0	40
	ENST00000000000										ENST00000642890	14	1875	47	642	31
	ENST00000000000										ENST00000643103	3	2008	44	0	40
	ENST00000000000										ENST00000643205	2	1784	49	0	40
	ENST00000000000										ENST00000643265	25	7687	7	2923	16
	ENST00000000000										ENST00000643375	19	6142	15	2791	18
	ENST00000000000										ENST00000643413	32	8881	5	5529	5		A:1
	ENST00000000000										ENST00000643440	5	887	62	887	28
	ENST00000000000										ENST00000643634	6	2636	35	0	40
	ENST00000000000										ENST00000643873	16	3360	28	0	40
	ENST00000000000										ENST00000644033	13	2138	39	1487	24
	ENST00000000000										ENST00000644127	7	1586	52	0	40
	ENST00000000000										ENST00000644157	3	1270	55	0	40
	ENST00000000000										ENST00000644193	11	1732	51	402	33
	ENST00000000000										ENST00000644332	2	476	66	0	40
	ENST00000000000										ENST00000644390	3	2712	33	0	40
	ENST00000000000										ENST00000644415	11	3216	29	898	27
	ENST00000000000										ENST00000644456	12	3162	30	0	40
	ENST00000000000										ENST00000644512	19	6171	14	2820	17
	ENST00000000000										ENST00000644630	16	2971	32	2485	20
	ENST00000000000										ENST00000644662	2	1152	57	0	40
	ENST00000000000										ENST00000644809	2	4286	21	0	40
	ENST00000000000										ENST00000644825	6	990	61	129	38
	ENST00000000000										ENST00000644890	16	3596	26	0	40
	ENST00000000000										ENST00000645031	13	1956	45	807	29
	ENST00000000000										ENST00000645072	26	5623	16	4482	10
	ENST00000000000										ENST00000645168	11	1118	59	283	36
	ENST00000000000										ENST00000645311	32	7114	8	4221	11
	ENST00000000000										ENST00000645342	9	3546	27	0	40
	ENST00000000000										ENST00000645450	5	2039	42	0	40
	ENST00000000000										ENST00000645477	26	5593	17	4485	9
	ENST00000000000										ENST00000645484	14	2097	40	0	40
	ENST00000000000										ENST00000645485	8	3864	24	0	40
	ENST00000000000										ENST00000645529	10	1856	48	393	34
	ENST00000000000										ENST00000645571	27	5499	18	0	40
	ENST00000000000										ENST00000645860	18	4151	23	3340	14
	ENST00000000000										ENST00000645969	4	4425	20	0	40
	ENST00000000000										ENST00000646285	22	7017	9	46	39
	ENST00000000000										ENST00000646324	14	1931	46	0	40
	ENST00000000000										ENST00000646474	7	1151	58	0	40
	ENST00000000000										ENST00000646796	34	6378	13	5391	7
	ENST00000000000										ENST00000647098	14	2179	38	807	29
	ENST00000000000										ENST00000647291	13	2671	34	2126	22
	ENST00000000000										ENST00000647341	10	1437	53	951	26
	ENST00000000000										ENST00000647383	9	1424	54	0	40
	ENST00000000000										ENST00000647396	18	6493	11	3406	13
	ENST00000000000										ENST00000647401	25	8647	6	4815	8
	ENST00000000000										ENST00000647517	13	2316	36	1580	23
	ENST00000000000										ENST00000647547	5	1043	60	501	32

ENSG00000115355 CCDC88A

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