GTEx V9
Gene Name : UPF3B regulator of nonsense mediated mRNA decay
NCBI GeneID : 65109 NCBI : NM_080632.3 NCBI : NP_542199.1
Chromosome : X Strand : -
MANE Select : ENST00000276201 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE UPF3B ENSG00000125351 119834022 119852963
GTEx V9 UPF3B ENSG00000125351 119805310 119852998
Gencode v40 UPF3B ENSG00000125351 119805310 119852998

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000345865 10 2335 2 1413 2 73.88 1 P:4 ENST00000345865 10 2335 2 1413 2 P:4
ENST00000276201 11 2378 1 1452 1 18.82 2 A:1 ENST00000276201 11 2343 1 1452 1 A:1
ENST00000636792 7 834 4 698 3 5.54 3 ENST00000636792 7 834 3 698 3
ENST00000478840 6 748 5 0 5 1.68 4 ENST00000478840 6 748 4 0 4
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000619445 9 1385 3 654 4 0.08 5 ENST00000000000

ENSG00000125351 UPF3B

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