TEXMST Gene Info

Gene Name : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

GTEx V8

NCBI GeneID : 6597	NCBI : NM_001387283.1	NCBI : NP_001374212.1
Chromosome : 19	Strand : +
MANE Select : ENST00000344626	MANE Plus Clinical : ENST00000646693

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SMARCA4	ENSG00000127616	10961030	11062273
GTEx V9	SMARCA4	ENSG00000127616	10961000	11065395
Gencode v40	SMARCA4	ENSG00000127616	10960931	11079426

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000344626	35	5392	4	4944	3	36.80	1	☀	P:3	ENST00000344626	35	5577	10	4944	3	☀	P:3
	ENST00000591545	24	5193	6	0	9	13.52	3			ENST00000591545	24	5192	15	3497	21
	ENST00000429416	36	5691	1	4944	3	12.80	4		P:3	ENST00000429416	36	5665	5	4944	3		P:3
	ENST00000586985	4	534	15	340	8	6.26	5			ENST00000586985	8	1968	39	1047	34
	ENST00000586921	2	569	12	0	9	1.78	7			ENST00000586921	2	569	48	0	42
	ENST00000591595	17	3377	10	0	9	1.78	8			ENST00000591595	17	3377	32	0	42
	ENST00000590574	34	5282	5	4845	7	0.58	9		A:1	ENST00000590574	34	5739	2	4845	11		A:1
	ENST00000585799	16	3842	9	0	9	0.52	10			ENST00000585799	16	3842	23	0	42
	ENST00000541122	35	5139	8	4854	5	0.35	11		A:1	ENST00000541122	35	5139	17	4854	7		A:1
	ENST00000586892	3	559	13	0	9	0.33	12			ENST00000586892	3	559	49	0	42
	ENST00000592604	19	2940	11	0	9	0.10	13			ENST00000592604	19	3358	33	0	42
	ENST00000587988	4	552	14	0	9	0.07	14			ENST00000587988	4	552	50	0	42
	ENST00000589677	35	5181	7	4851	6	0.03	15		A:1	ENST00000589677	35	5181	16	4851	10		A:1

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000413806	37	5512	2	5046	1	19.24	2			ENST00000000000
	ENST00000450717	35	5506	3	5040	2	5.86	6			ENST00000000000
	ENST00000000000										ENST00000444061	35	5393	14	4842	15		A:1
	ENST00000000000										ENST00000538456	8	1108	44	1009	35
	ENST00000000000										ENST00000586122	5	512	51	0	42
	ENST00000000000										ENST00000592158	4	911	45	666	37
	ENST00000000000										ENST00000642350	27	3750	25	3438	22
	ENST00000000000										ENST00000642508	18	2612	38	2398	30
	ENST00000000000										ENST00000642628	35	5637	6	4941	5
	ENST00000000000										ENST00000642726	35	5675	3	4941	5
	ENST00000000000										ENST00000643208	27	3940	22	3498	20
	ENST00000000000										ENST00000643296	34	5563	11	4854	7		A:1
	ENST00000000000										ENST00000643534	25	3426	30	3124	28
	ENST00000000000										ENST00000643549	35	5609	7	4950	2
	ENST00000000000										ENST00000643857	25	3637	27	3206	25
	ENST00000000000										ENST00000643929	6	1865	41	0	42
	ENST00000000000										ENST00000643995	32	4817	18	4367	17
	ENST00000000000										ENST00000644065	27	3802	24	3578	19
	ENST00000000000										ENST00000644267	21	3382	31	0	42
	ENST00000000000										ENST00000644290	16	3355	34	577	38
	ENST00000000000										ENST00000644327	29	4237	19	3142	27
	ENST00000000000										ENST00000644737	34	5777	1	4854	7		A:1
	ENST00000000000										ENST00000644760	5	740	46	471	39
	ENST00000000000										ENST00000644963	28	4045	20	3595	18
	ENST00000000000										ENST00000645061	28	4035	21	2958	29
	ENST00000000000										ENST00000645236	11	1887	40	1568	31
	ENST00000000000										ENST00000645387	5	627	47	177	40
	ENST00000000000										ENST00000645460	34	5457	13	4842	15		A:1
	ENST00000000000										ENST00000645648	21	3250	35	1158	32
	ENST00000000000										ENST00000646183	26	3496	29	3284	23
	ENST00000000000										ENST00000646236	13	2802	37	705	36
	ENST00000000000										ENST00000646484	34	5579	9	4845	11		A:1
	ENST00000000000										ENST00000646510	35	5595	8	4845	11		A:1
	ENST00000000000										ENST00000646513	11	1127	43	1127	33
	ENST00000000000										ENST00000646593	21	3206	36	168	41
	ENST00000000000										ENST00000646693	36	5670	4	5040	1
	ENST00000000000										ENST00000646746	26	3680	26	3244	24
	ENST00000000000										ENST00000646889	6	1659	42	0	42
	ENST00000000000										ENST00000647011	3	487	52	0	42
	ENST00000000000										ENST00000647230	34	5554	12	4845	11		A:1
	ENST00000000000										ENST00000647268	25	3522	28	3198	26

ENSG00000127616 SMARCA4

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