GTEx V9
Gene Name : lymphocyte specific protein 1
NCBI GeneID : 4046 NCBI : NM_002339.3 NCBI : NP_002330.1
Chromosome : 11 Strand : +
MANE Select : ENST00000311604 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE LSP1 ENSG00000130592 1853084 1892263
GTEx V9 LSP1 ENSG00000130592 1852969 1892267
Gencode v40 LSP1 ENSG00000130592 1850903 1892267

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000311604 11 1699 6 1020 2 34.91 1 P:2 ENST00000311604 11 1585 6 1020 2 P:2
ENST00000405957 11 1785 5 834 3 28.31 3 A:2 ENST00000405957 11 1785 5 834 3 A:2
ENST00000485341 10 2024 2 0 10 4.11 4 ENST00000485341 10 2024 2 0 15
ENST00000432093 8 968 7 666 7 0.38 6 ENST00000432093 8 968 8 666 7
ENST00000406638 11 2640 1 834 3 30.77 2 A:2 ENST00000406638 11 2640 1 834 3 A:2
ENST00000484895 4 436 10 0 10 0.02 10 ENST00000484895 4 436 16 0 15
ENST00000451814 4 417 11 194 8 0.06 9 ENST00000451814 4 417 17 194 12
ENST00000457279 8 887 8 825 6 0.11 8 ENST00000457279 8 887 10 825 6
ENST00000381775 12 2016 3 1404 1 1.05 5 A:2 ENST00000381775 12 2016 3 1404 1 A:2
ENST00000612798 11 1881 4 834 3 0.29 7 A:2 ENST00000612798 11 1881 4 834 3 A:2
ENST00000421485 4 682 9 180 9 0.01 11 ENST00000421485 4 682 12 180 13
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000417766 8 887 10 666 7
ENST00000000000 ENST00000418975 3 581 14 366 11
ENST00000000000 ENST00000429923 5 582 13 525 9
ENST00000000000 ENST00000446808 5 574 15 378 10
ENST00000000000 ENST00000464670 2 244 18 0 15
ENST00000000000 ENST00000472974 9 903 9 0 15
ENST00000000000 ENST00000676039 2 1050 7 53 14

ENSG00000130592 LSP1

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