GTEx V9
Gene Name : nucleoporin 54
NCBI GeneID : 53371 NCBI : NM_017426.4 NCBI : NP_059122.2
Chromosome : 4 Strand : -
MANE Select : ENST00000264883 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE NUP54 ENSG00000138750 76114664 76148397
GTEx V9 NUP54 ENSG00000138750 76114658 76148515
Gencode v40 NUP54 ENSG00000138750 76107561 76148485

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000264883 12 2367 1 1524 1 86.73 1 P:2 ENST00000264883 12 2249 9 1524 2 P:2
ENST00000508604 4 1671 3 0 8 2.27 3 ENST00000508604 4 1671 19 0 19
ENST00000513248 3 531 12 0 8 0.32 10 ENST00000513248 3 531 27 0 19
ENST00000508465 5 744 8 0 8 0.01 15 ENST00000508465 12 1809 18 1317 4
ENST00000507257 10 1938 2 309 5 4.37 2 ENST00000507257 10 2002 14 309 14
ENST00000514313 2 537 11 0 8 1.88 4 ENST00000514313 9 4547 2 0 19
ENST00000514987 11 1563 5 1380 2 0.44 7 ENST00000514987 11 1949 15 1380 3
ENST00000510569 3 494 14 0 8 0.38 9 ENST00000510569 12 2754 5 0 19
ENST00000512151 11 1385 6 309 5 0.25 11 ENST00000512151 11 1385 21 309 14
ENST00000502850 12 1604 4 417 4 1.23 6 ENST00000502850 12 1604 20 417 12
ENST00000504173 2 314 15 0 8 1.41 5 ENST00000504173 2 314 29 0 19
ENST00000515460 6 849 7 0 8 0.41 8 ENST00000515460 13 2413 7 984 6
ENST00000506098 5 548 10 0 8 0.21 12 ENST00000506098 5 548 26 0 19
ENST00000513352 5 579 9 255 7 0.02 14 ENST00000513352 5 579 24 255 16
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000514901 4 500 13 476 3 0.06 13 ENST00000000000
ENST00000000000 ENST00000508583 5 633 23 0 19
ENST00000000000 ENST00000510884 4 441 28 0 19
ENST00000000000 ENST00000514307 4 566 25 0 19
ENST00000000000 ENST00000695546 15 6815 1 417 12
ENST00000000000 ENST00000695547 13 4320 3 1686 1 A:1
ENST00000000000 ENST00000695548 12 2234 10 0 19
ENST00000000000 ENST00000695549 13 2411 8 1143 5
ENST00000000000 ENST00000695550 12 2175 11 981 7
ENST00000000000 ENST00000695551 11 2151 13 732 11
ENST00000000000 ENST00000695552 11 3088 4 876 9
ENST00000000000 ENST00000695553 14 2520 6 252 18
ENST00000000000 ENST00000695554 9 1917 17 762 10
ENST00000000000 ENST00000695555 7 1360 22 255 16
ENST00000000000 ENST00000695556 11 2156 12 912 8
ENST00000000000 ENST00000695557 9 1919 16 0 19

ENSG00000138750 NUP54

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