TEXMST Gene Info

SLCO1C1

GTEx V9

Gene Name : solute carrier organic anion transporter family member 1C1

GTEx V8

NCBI GeneID : 53919	NCBI : NM_017435.5	NCBI : NP_059131.1
Chromosome : 12	Strand : +
MANE Select : ENST00000266509	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SLCO1C1	ENSG00000139155	20695332	20753386
GTEx V9	SLCO1C1	ENSG00000139155	20695354	20753386
Gencode v40	SLCO1C1	ENSG00000139155	20695331	20753386

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
☉	ENST00000266509	15	3365	1	2139	2	65.70	1	☀	P:1	ENST00000266509	15	3498	1	2139	2	☀	P:1
	ENST00000545102	13	2868	2	1839	4	4.75	4			ENST00000545102	13	2868	2	1839	4
	ENST00000534996	3	557	8	0	6	0.44	8			ENST00000534996	3	557	8	0	6
	ENST00000535609	3	780	7	0	6	12.92	2			ENST00000535609	3	780	7	0	6
	ENST00000497911	3	812	6	0	6	4.33	5			ENST00000497911	3	812	6	0	6
	ENST00000540354	15	2529	4	1992	3	0.81	7			ENST00000540354	15	2529	4	1992	3
	ENST00000545604	16	2557	3	2193	1	7.67	3			ENST00000545604	16	2557	3	2193	1
	ENST00000539415	14	2414	5	141	5	3.38	6			ENST00000539415	14	2414	5	141	5

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000539443	2	171	9	0	6

ENSG00000139155 SLCO1C1

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