GTEx V9
Gene Name : synaptonemal complex protein 3
NCBI GeneID : 50511 NCBI : NM_001177949.2 NCBI : NP_001171420.1
Chromosome : 12 Strand : -
MANE Select : ENST00000392924 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE SYCP3 ENSG00000139351 101728648 101739462
GTEx V9 SYCP3 ENSG00000139351 101728647 101739472
Gencode v40 SYCP3 ENSG00000139351 101728647 101739472

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000478238 2 665 3 0 2 0.55 3 ENST00000478238 2 665 5 0 4
ENST00000392927 9 1120 2 711 1 0.80 2 P:1 ENST00000392927 9 1120 2 711 1 P:1
ENST00000478139 6 3690 1 0 2 98.66 1 ENST00000478139 6 3690 1 0 4
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000266743 9 1068 4 711 1 P:1
ENST00000000000 ENST00000392924 9 1119 3 711 1 P:1

ENSG00000139351 SYCP3

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