TEXMST Gene Info

SMARCC2

GTEx V9

Gene Name : SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2

GTEx V8

NCBI GeneID : 6601	NCBI : NM_001330288.2	NCBI : NP_001317217.1
Chromosome : 12	Strand : -
MANE Select : ENST00000550164	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SMARCC2	ENSG00000139613	56162359	56189483
GTEx V9	SMARCC2	ENSG00000139613	56162982	56189567
Gencode v40	SMARCC2	ENSG00000139613	56162358	56189567

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000267064	28	4076	3	3645	2	13.60	2		A:2	ENST00000267064	28	4076	3	3645	2		A:2
	ENST00000347471	29	3839	4	3393	4	7.85	3		P:4	ENST00000347471	29	3839	4	3393	4		P:4
☉	ENST00000394023	30	4271	1	3459	3	61.34	1		A:2	ENST00000394023	30	4271	2	3459	3		A:2
	ENST00000548130	9	1238	7	0	7	1.93	7			ENST00000548130	9	1238	7	0	7
	ENST00000549757	7	1062	8	0	7	2.24	6			ENST00000549757	7	1062	8	0	7
	ENST00000550164	29	4114	2	3738	1	5.76	4	☀	A:2	ENST00000550164	29	5090	1	3738	1	☀	A:2
	ENST00000550859	8	656	11	0	7	0.03	12			ENST00000550859	8	656	11	0	7
	ENST00000552674	29	3730	5	318	5	0.17	11			ENST00000552674	29	3730	5	318	5
	ENST00000552566	3	534	13	0	7	0.52	9			ENST00000552566	3	534	13	0	7
	ENST00000549209	5	439	14	0	7	0.01	14			ENST00000549209	5	439	14	0	7
	ENST00000547356	3	741	10	0	7	0.52	10			ENST00000547356	3	741	10	0	7
	ENST00000552931	4	608	12	0	7	1.25	8			ENST00000552931	4	608	12	0	7
	ENST00000550150	3	3244	6	0	7	4.75	5			ENST00000550150	3	3244	6	0	7
	ENST00000550519	8	789	9	318	5	0.03	13			ENST00000550519	8	789	9	318	5

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000552627	4	409	15	0	7

ENSG00000139613 SMARCC2

TPM Log2 Log10

Copyright © 2022 TDL Lab. All Rights Reserved.