GTEx V9
Gene Name : SS18 subunit of BAF chromatin remodeling complex
NCBI GeneID : 6760 NCBI : NM_001007559.3 NCBI : NP_001007560.1
Chromosome : 18 Strand : -
MANE Select : ENST00000415083 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE SS18 ENSG00000141380 26016253 26090613
GTEx V9 SS18 ENSG00000141380 26016252 26091217
Gencode v40 SS18 ENSG00000141380 26016252 26091217

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000415083 11 3414 1 1257 1 92.85 1 A:1 ENST00000415083 11 3402 1 1257 1 A:1
ENST00000580958 3 775 8 0 16 3.49 2 ENST00000580958 3 775 8 0 20
ENST00000269137 10 1836 4 1164 3 2.19 3 P:4 ENST00000269137 10 1836 4 1164 3 P:4
ENST00000585121 11 1545 6 255 7 0.03 10 ENST00000585121 11 1545 6 255 7
ENST00000579640 11 1840 3 177 11 0.43 5 ENST00000579640 11 1840 3 177 14
ENST00000578954 6 756 10 183 9 0.02 14 ENST00000578954 6 756 10 183 11
ENST00000585241 7 774 9 0 16 0.21 6 ENST00000585241 7 774 9 0 20
ENST00000580003 2 609 13 0 16 0.07 8 ENST00000580003 2 609 13 0 20
ENST00000578700 6 575 15 138 13 0.00 18 ENST00000578700 6 575 18 138 17
ENST00000579061 5 646 12 457 4 0.05 9 ENST00000579061 5 646 12 457 4
ENST00000542420 11 2321 2 1188 2 0.47 4 ENST00000542420 11 2321 2 1188 2
ENST00000581570 6 571 16 183 9 0.02 13 ENST00000581570 6 571 19 183 11
ENST00000584083 5 663 11 391 5 0.01 17 ENST00000584083 5 663 11 391 5
ENST00000580642 5 545 17 177 11 0.02 15 ENST00000580642 5 545 21 177 14
ENST00000583595 3 375 19 0 16 0.09 7 ENST00000583595 3 375 25 0 20
ENST00000269138 10 1548 5 186 8 0.02 12 ENST00000269138 10 1548 5 186 10
ENST00000539244 8 977 7 126 14 0.00 19 ENST00000539244 8 977 7 126 18
ENST00000582448 6 585 14 108 15 0.02 11 ENST00000582448 6 585 15 108 19
ENST00000582792 5 531 18 285 6 0.01 16 ENST00000582792 5 531 22 285 6
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000577572 6 510 23 207 9
ENST00000000000 ENST00000577636 6 580 16 168 16
ENST00000000000 ENST00000577751 4 580 16 0 20
ENST00000000000 ENST00000578595 3 406 24 0 20
ENST00000000000 ENST00000580751 5 547 20 183 11
ENST00000000000 ENST00000581021 4 588 14 210 8
ENST00000000000 ENST00000582092 3 215 26 0 20

ENSG00000141380 SS18

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