TEXMST Gene Info

Gene Name : calcium voltage-gated channel subunit alpha1 A

GTEx V8

NCBI GeneID : 773	NCBI : NM_001127222.2	NCBI : NP_001120694.1
Chromosome : 19	Strand : -
MANE Select : ENST00000360228	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	CACNA1A	ENSG00000141837	13206442	13506479
GTEx V9	CACNA1A	ENSG00000141837	13206441	13633025
Gencode v40	CACNA1A	ENSG00000141837	13206441	13633025

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000636670	1	740	37	0	15	32.22	1			ENST00000636670	1	740	50	0	27
	ENST00000637832	6	701	38	0	15	8.86	2			ENST00000637832	6	701	52	0	27
	ENST00000637485	2	5481	8	0	15	8.77	3			ENST00000637485	2	5481	16	0	27
	ENST00000637168	1	2979	16	0	15	7.65	4			ENST00000637168	1	2979	24	0	27
☉	ENST00000592864	3	1623	29	108	14	7.08	5			ENST00000592864	3	1623	39	270	21
	ENST00000635988	3	2548	19	0	15	5.51	6			ENST00000635988	3	2548	28	0	27
	ENST00000636074	1	1516	30	0	15	5.10	7			ENST00000636074	1	1516	40	0	27
	ENST00000637475	1	1975	21	0	15	4.90	8			ENST00000637475	1	1975	30	0	27
	ENST00000635742	12	1910	23	0	15	3.05	9			ENST00000635742	12	1910	32	0	27
	ENST00000636816	6	1978	20	0	15	2.20	10			ENST00000636816	6	1978	29	0	27
	ENST00000590205	1	3340	13	0	15	2.12	11			ENST00000590205	1	3340	21	0	27
	ENST00000636966	5	3938	9	0	15	2.11	12			ENST00000636966	5	3938	17	0	27
	ENST00000637625	1	1890	24	0	15	1.99	13			ENST00000637625	1	1890	33	0	27
	ENST00000593160	8	1651	28	0	15	1.80	14			ENST00000593160	8	1651	38	0	27
	ENST00000635917	11	1832	25	0	15	1.30	15			ENST00000635917	11	1832	35	0	27
	ENST00000637117	3	1124	33	0	15	1.05	16			ENST00000637117	3	1124	44	0	27
	ENST00000593267	3	567	41	0	15	0.81	17			ENST00000593267	3	567	56	0	27
	ENST00000637952	1	3894	10	0	15	0.55	18			ENST00000637952	1	3894	18	0	27
	ENST00000636610	8	3011	15	0	15	0.54	19			ENST00000636610	8	3011	23	0	27
	ENST00000637616	3	3081	14	0	15	0.51	20			ENST00000637616	3	3081	22	0	27
	ENST00000637981	4	1346	32	0	15	0.42	21			ENST00000637981	4	1346	42	0	27
	ENST00000636022	5	552	42	0	15	0.40	22			ENST00000636022	5	552	57	0	27
	ENST00000638009	47	8665	1	6786	7	0.37	23		A:2	ENST00000638009	47	8645	4	6786	13		A:2
	ENST00000636974	11	1783	26	0	15	0.11	24			ENST00000636974	11	1783	36	0	27
	ENST00000635786	5	2840	17	0	15	0.11	25			ENST00000635786	5	2840	25	0	27
	ENST00000573891	9	896	35	238	12	0.10	26			ENST00000573891	9	896	47	238	23
	ENST00000574974	6	903	34	309	11	0.10	27			ENST00000574974	6	903	46	246	22
	ENST00000587525	19	3765	11	2946	8	0.05	28			ENST00000587525	19	3765	19	2946	16
	ENST00000636984	2	1968	22	0	15	0.04	29			ENST00000636984	2	1968	31	0	27
	ENST00000637004	12	2829	18	0	15	0.04	30			ENST00000637004	12	2829	26	0	27
	ENST00000574822	8	806	36	0	15	0.03	31			ENST00000574822	8	806	49	0	27
	ENST00000636389	47	8137	5	6909	5	0.03	32		A:2	ENST00000636389	47	8137	6	6909	9		A:2
	ENST00000637819	14	1378	31	1378	10	0.02	33			ENST00000637819	14	1378	41	1378	19
	ENST00000360228	47	8627	3	7521	3	0.01	34	☀		ENST00000360228	47	8647	3	7521	5	☀
	ENST00000637774	3	3381	12	0	15	0.01	35			ENST00000637774	3	3381	20	0	27
	ENST00000587451	2	673	39	0	15	0.01	36			ENST00000587451	2	673	53	0	27
	ENST00000636058	8	656	40	134	13	0.01	37			ENST00000636058	8	656	54	134	25
	ENST00000636473	16	1653	27	1653	9	0.01	38			ENST00000636473	16	1653	37	1653	18
	ENST00000637736	46	8340	4	7383	4	0.01	39			ENST00000637736	46	8340	5	7383	7
	ENST00000586190	2	459	43	0	15	0.01	40			ENST00000586190	2	459	59	0	27
	ENST00000637432	48	7809	6	6801	6	0.00	41		A:2	ENST00000637432	48	7809	8	6801	10		A:2
	ENST00000637769	47	8648	2	7524	1	0.00	41		A:2	ENST00000637769	47	8648	2	7524	3		A:2
	ENST00000635727	47	7536	7	7524	1	0.00	43			ENST00000635727	47	7536	10	7524	3

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000000000										ENST00000573710	47	7569	9	7527	2		A:2
	ENST00000000000										ENST00000585802	18	2693	27	2646	17
	ENST00000000000										ENST00000635895	47	8657	1	6786	13		A:2
	ENST00000000000										ENST00000636012	46	7500	11	7488	6
	ENST00000000000										ENST00000636549	48	6792	15	6792	11		A:2
	ENST00000000000										ENST00000636768	10	1034	45	228	24
	ENST00000000000										ENST00000637276	46	7135	12	6750	15
	ENST00000000000										ENST00000637297	6	637	55	637	20
	ENST00000000000										ENST00000637692	7	1245	43	0	27
	ENST00000000000										ENST00000637777	8	728	51	79	26
	ENST00000000000										ENST00000637809	7	871	48	0	27
	ENST00000000000										ENST00000637927	47	6847	14	6789	12		A:2
	ENST00000000000										ENST00000637966	16	1887	34	0	27
	ENST00000000000										ENST00000638029	48	7814	7	7539	1		P:3
	ENST00000000000										ENST00000638114	2	517	58	0	27
	ENST00000000000										ENST00000664864	49	6987	13	6987	8		A:2

ENSG00000141837 CACNA1A

TPM Log2 Log10