GTEx V9
Gene Name : SHQ1, H/ACA ribonucleoprotein assembly factor
NCBI GeneID : 55164 NCBI : NM_018130.3 NCBI : NP_060600.2
Chromosome : 3 Strand : -
MANE Select : ENST00000325599 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE SHQ1 ENSG00000144736 72749277 72848445
GTEx V9 SHQ1 ENSG00000144736 72749276 72861914
Gencode v40 SHQ1 ENSG00000144736 72749276 72861914

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000325599 11 2879 2 1734 1 90.82 1 P:1 ENST00000325599 11 2846 2 1734 1 P:1
ENST00000468371 3 4024 1 0 5 7.85 2 ENST00000468371 3 4024 1 0 6
ENST00000444040 11 2844 3 153 4 0.31 5 ENST00000444040 11 2844 3 153 5
ENST00000468347 3 134 7 0 5 0.47 3 ENST00000468347 3 134 8 0 6
ENST00000471526 3 553 6 192 3 0.04 7 ENST00000471526 3 553 6 192 4
ENST00000475558 4 666 5 0 5 0.11 6 ENST00000475558 4 666 5 0 6
ENST00000463369 11 2065 4 1650 2 0.40 4 ENST00000463369 11 2065 4 1650 2
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000482785 5 502 7 332 3

ENSG00000144736 SHQ1

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