GTEx V9
Gene Name : lipocalin 2
NCBI GeneID : 3934 NCBI : NM_005564.5 NCBI : NP_005555.2
Chromosome : 9 Strand : +
MANE Select : ENST00000277480 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE LCN2 ENSG00000148346 128149453 128153453
GTEx V9 LCN2 ENSG00000148346 128149070 128153455
Gencode v40 LCN2 ENSG00000148346 128149070 128153453

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000277480 7 822 3 597 1 98.73 1 P:2 ENST00000277480 7 820 3 597 2 P:2
ENST00000494317 4 625 4 0 3 0.87 2 ENST00000494317 4 625 5 0 4
ENST00000487719 2 427 6 0 3 0.02 6 ENST00000487719 2 427 7 0 4
ENST00000488391 5 485 5 0 3 0.18 3 ENST00000488391 5 485 6 0 4
ENST00000373017 7 848 2 597 1 0.03 5 P:2 ENST00000373017 7 848 2 597 2 P:2
ENST00000470902 7 877 1 0 3 0.17 4 ENST00000470902 7 877 1 0 4
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000372998 7 631 4 603 1 A:2

ENSG00000148346 LCN2

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