GTEx V9
Gene Name : protocadherin 1
NCBI GeneID : 5097 NCBI : NM_032420.5 NCBI : NP_115796.2
Chromosome : 5 Strand : -
MANE Select : ENST00000287008 MANE Plus Clinical :
  Gene Symbol Ensembl Gene ID Start End
MANE PCDH1 ENSG00000156453 141853090 141878410
GTEx V9 PCDH1 ENSG00000156453 141853110 141879246
Gencode v40 PCDH1 ENSG00000156453 141853089 141879246

Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS Transcript ID Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000394536 3 3827 2 3183 2 85.88 1 ENST00000394536 3 3827 2 3183 2
ENST00000287008 5 4793 1 3714 1 13.39 2 P:1 ENST00000287008 5 4814 1 3714 1 P:1
ENST00000511044 2 2674 3 0 5 0.09 5 ENST00000511044 2 2674 4 0 7
ENST00000503492 5 2373 4 1149 3 0.10 4 ENST00000503492 5 2373 6 1149 3
ENST00000505937 3 825 5 380 4 0.53 3 ENST00000505937 3 825 7 380 5
Gencode v26 (GTEx V9) Gencode v40
V9
TRP-Tx
No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
Exp
Tx%
Exp
Rank
MANE
Match
APPRIS No Match
Transcript ID
Exon
Count
Transcript
Length
Tx Length
Rank
CDS
Length
CDS
Rank
MANE
Match
APPRIS
ENST00000000000 ENST00000357517 3 3307 3 0 7
ENST00000000000 ENST00000514773 2 553 8 452 4
ENST00000000000 ENST00000515351 2 2489 5 52 6

ENSG00000156453 PCDH1

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