TEXMST Gene Info

SHANK1

GTEx V9

Gene Name : SH3 and multiple ankyrin repeat domains 1

GTEx V8

NCBI GeneID : 50944	NCBI : NM_016148.5	NCBI : NP_057232.2
Chromosome : 19	Strand : -
MANE Select : ENST00000293441	MANE Plus Clinical :

	Gene Symbol	Ensembl Gene ID	Start	End
MANE	SHANK1	ENSG00000161681	50659255	50719802
GTEx V9	SHANK1	ENSG00000161681	50661826	50719450
Gencode v40	SHANK1	ENSG00000161681	50659254	50719802

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000468654	3	668	6	552	5	35.83	1			ENST00000468654	3	964	5	552	4
☉	ENST00000391814	25	6622	2	6510	1	27.26	2		A:2	ENST00000391814	25	6622	2	6510	1		A:2
	ENST00000293441	23	6643	1	6486	2	17.45	3	☀	P:2	ENST00000293441	24	9636	1	6486	2	☀	P:2
	ENST00000483128	3	780	5	0	6	9.98	4			ENST00000483128	3	780	6	0	5
	ENST00000359082	22	6459	3	6459	3	4.77	5			ENST00000359082	22	6459	3	6459	3
	ENST00000461154	2	558	7	0	6	3.21	6			ENST00000461154	2	558	7	0	5
	ENST00000391813	9	4785	4	4647	4	1.30	7			ENST00000391813	9	4785	4	0	5

Gencode v26 (GTEx V9)											Gencode v40
V9 TRP-Tx	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	Exp Tx%	Exp Rank	MANE Match	APPRIS	No Match Transcript ID	Exon Count	Transcript Length	Tx Length Rank	CDS Length	CDS Rank	MANE Match	APPRIS
	ENST00000483981	2	422	8	0	6	0.20	8			ENST00000000000

ENSG00000161681 SHANK1

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